| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is purR [H]
Identifier: 116492096
GI number: 116492096
Start: 336603
End: 337439
Strand: Direct
Name: purR [H]
Synonym: PEPE_0292
Alternate gene names: 116492096
Gene position: 336603-337439 (Clockwise)
Preceding gene: 116492095
Following gene: 116492097
Centisome position: 18.37
GC content: 39.31
Gene sequence:
>837_bases ATGAAATTGAAGCGAAGTGAACGATTGATTGATATGACGAACTATTTAATCAATCATCCAAGAACGCTCATAACTTCTGG ATTTTTTGTTACAAGATATTCATCCGCTAAATCTTCTATTAGCGAAGATTTATCCATTATGAAATCAACTTTAGAAAAAC AACAACTAGGAACCATTGAAATTACTAATGGGGCTGCTGGTGGTATTAAATATCTTCCGGGAATTGGATCAGAGGAGGCT CACAAAGTTGTTGATGAGTTAACTGAACAACTAGCGGATCCAAGTCGTAAACTACCTGGTGGGTATCTTTACATGTCTGA TTTGTTAGGCCATCCCAGTACCTTACGGGCCATTGGCCGAATGTTAGCTAGCGAATATATGCGTTCTGATGTTGATGCAG TTATGACTGTGGAAACTAAAGGGATTCCACTAGCTCAAGCGGTTGCGAACTATTTAAATGTTCCATTTATTATTGTGCGT CATGAATCCGTGATTACCGAAGGTTCGACTATTTCAGTTAACTACGTTTCACGTTCATCAGAACGTATCCAAAAAATGGA ATTGTCTAAACGTAGTTTACAGCGAGGAATGAAAGTTTTAATCGTGGATGATTACATGAAGGGTGGCGGCACGGTTCATG CCATGGTTGATTTACTGAAAGAATTTGAAGCTGAATTAACCGGCATTGCCGTCTTCGCGGAAGGTACATACAAGGGACAA CGTGCGATTGAAGACTTTACTTCCTTGTTAAATGTCGATACATCTCAAGATGGACAGGTCCAAATTAAGGCCGGAAATTA TTTTGAAAGAAACTTTAAGGATATTGAGGAGCGCTAG
Upstream 100 bases:
>100_bases TCCGAACATTATTAATGAACTATGATATTATATTCATTGGTAAGTAAAAAGTAAGTAATTTTTTGCGAATAATACGCAAA AGAAGAGTGGAGTGAAACCA
Downstream 100 bases:
>100_bases TAATAATGGAAAAAAATACAATCATTTTAGCTGCAGGTCAAGGTACTCGAATGAAATCAAAACTATATAAAGTTTTGCAT CAAGTTTGTGGAAAAGCCAT
Product: pur operon repressor
Products: AMP; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKLKRSERLIDMTNYLINHPRTLITSGFFVTRYSSAKSSISEDLSIMKSTLEKQQLGTIEITNGAAGGIKYLPGIGSEEA HKVVDELTEQLADPSRKLPGGYLYMSDLLGHPSTLRAIGRMLASEYMRSDVDAVMTVETKGIPLAQAVANYLNVPFIIVR HESVITEGSTISVNYVSRSSERIQKMELSKRSLQRGMKVLIVDDYMKGGGTVHAMVDLLKEFEAELTGIAVFAEGTYKGQ RAIEDFTSLLNVDTSQDGQVQIKAGNYFERNFKDIEER
Sequences:
>Translated_278_residues MKLKRSERLIDMTNYLINHPRTLITSGFFVTRYSSAKSSISEDLSIMKSTLEKQQLGTIEITNGAAGGIKYLPGIGSEEA HKVVDELTEQLADPSRKLPGGYLYMSDLLGHPSTLRAIGRMLASEYMRSDVDAVMTVETKGIPLAQAVANYLNVPFIIVR HESVITEGSTISVNYVSRSSERIQKMELSKRSLQRGMKVLIVDDYMKGGGTVHAMVDLLKEFEAELTGIAVFAEGTYKGQ RAIEDFTSLLNVDTSQDGQVQIKAGNYFERNFKDIEER >Mature_278_residues MKLKRSERLIDMTNYLINHPRTLITSGFFVTRYSSAKSSISEDLSIMKSTLEKQQLGTIEITNGAAGGIKYLPGIGSEEA HKVVDELTEQLADPSRKLPGGYLYMSDLLGHPSTLRAIGRMLASEYMRSDVDAVMTVETKGIPLAQAVANYLNVPFIIVR HESVITEGSTISVNYVSRSSERIQKMELSKRSLQRGMKVLIVDDYMKGGGTVHAMVDLLKEFEAELTGIAVFAEGTYKGQ RAIEDFTSLLNVDTSQDGQVQIKAGNYFERNFKDIEER
Specific function: Controls the transcription of the pur operon for purine biosynthetic genes, binds to the control region of the operon. DNA binding is inhibited by 5-phosphoribosyl 1-pyrophosphate [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR015265 - InterPro: IPR010078 - InterPro: IPR011991 - ProDom: PD029816 [H]
Pfam domain/function: PF00156 Pribosyltran; PF09182 PuR_N [H]
EC number: 2.4.2.7 [C]
Molecular weight: Translated: 30900; Mature: 30900
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKRSERLIDMTNYLINHPRTLITSGFFVTRYSSAKSSISEDLSIMKSTLEKQQLGTIE CCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCEEE ITNGAAGGIKYLPGIGSEEAHKVVDELTEQLADPSRKLPGGYLYMSDLLGHPSTLRAIGR ECCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCHHHHHHHH MLASEYMRSDVDAVMTVETKGIPLAQAVANYLNVPFIIVRHESVITEGSTISVNYVSRSS HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCHHEECCCEEEEEEECCHH ERIQKMELSKRSLQRGMKVLIVDDYMKGGGTVHAMVDLLKEFEAELTGIAVFAEGTYKGQ HHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCHH RAIEDFTSLLNVDTSQDGQVQIKAGNYFERNFKDIEER HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCC >Mature Secondary Structure MKLKRSERLIDMTNYLINHPRTLITSGFFVTRYSSAKSSISEDLSIMKSTLEKQQLGTIE CCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCEEE ITNGAAGGIKYLPGIGSEEAHKVVDELTEQLADPSRKLPGGYLYMSDLLGHPSTLRAIGR ECCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCHHHHHHHH MLASEYMRSDVDAVMTVETKGIPLAQAVANYLNVPFIIVRHESVITEGSTISVNYVSRSS HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCHHEECCCEEEEEEECCHH ERIQKMELSKRSLQRGMKVLIVDDYMKGGGTVHAMVDLLKEFEAELTGIAVFAEGTYKGQ HHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCHH RAIEDFTSLLNVDTSQDGQVQIKAGNYFERNFKDIEER HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 560 [C]
Specific activity: 14
Km value (mM): 0.02 {adenine}} 0.125 {5-phospho-alpha-D-ribose} [C]
Substrates: Adenine; 5-Phospho-alpha-D-ribose 1-diphosphate [C]
Specific reaction: Adenine + 5-Phospho-alpha-D-ribose 1-diphosphate --> AMP + Diphosphate [C]
General reaction: Pentosyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 7638212 [H]