BacMap

Definition	Pediococcus pentosaceus ATCC 25745, complete genome.
Accession	NC_008525
Length	1,832,387

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The map label for this gene is znuC [H]

Identifier: 116492094

GI number: 116492094

Start: 334986

End: 335666

Strand: Direct

Name: znuC [H]

Synonym: PEPE_0290

Alternate gene names: 116492094

Gene position: 334986-335666 (Clockwise)

Preceding gene: 116492093

Following gene: 116492095

Centisome position: 18.28

GC content: 36.42

Gene sequence:

>681_bases
ATGACTGAAACGCTTGTTCAGGTTCAAAAATTAGCAATGGATTTTCCAGGGCAAAAATTATTTAATAATTTGAGTTTTGA
TGTAGATCGTCGTGACTTTCTAAGCATTATCGGCGAAAATGGGGTCGGAAAGACGACTTTGATTCGCGCACTACTGAATC
AAGTTAAGCCTACGAGTGGTAGCATCAAATTTCGTAAAGGGACGAAGGTAGGCTATGTGCCTCAATTTAGGAATATTGAA
CGAGATTATCCCTTATCTATTCGAGATTTCGTAGCCTTAAATTTACAAAACGGAAAAATGCCGTGGCTATCCAAAATGGA
ACGAACGCAACTCGATGAAATTCTTGAAGAAACTGATTTAGTTGATATTCAAAATACTAGAATTGGACGAGCTTCGGGTG
GACAAAAACAGAAAGCCTATTTGGCACAAGCCTTAGTGGATAATCCAGATTTATTGATTTTAGATGAATCAACAGCTAGT
TTAGATACAGTTCGTAAATATGAACTATTTAATTTAGTCCAACACTTTAATCAACAGCATGATTTAACCGTAATTTCCGT
TACGCATGATTTTGATTTAATGCAACGCTACTCCAATCGTTATTTGATGCTAAAAGAAGATCACTACGCATTGGGAGAAG
TAGCTGATATTAAAAATGAGGAGGACTTGCTAGATGTTTAG

Upstream 100 bases:

>100_bases
TCGTGAACGTCACAGAGACGATGCCGAAGGGAAAAAATTATCAAACGTGGATGCTTTCACAGTTAAACCAAATTAGTAAA
ATACAAGAGGGTAAAAATTA

Downstream 100 bases:

>100_bases
TTTTGAGTTTATGCAAAATGCCTACATTGCAGGGACCTTCATTGCCATTATTTGTGGAATTATGGGTGTGTATGTTGTAG
GACGTAACATGTCATTTTTA

Product: ABC-type Mn/Zn transport system, ATPase component

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTETLVQVQKLAMDFPGQKLFNNLSFDVDRRDFLSIIGENGVGKTTLIRALLNQVKPTSGSIKFRKGTKVGYVPQFRNIE
RDYPLSIRDFVALNLQNGKMPWLSKMERTQLDEILEETDLVDIQNTRIGRASGGQKQKAYLAQALVDNPDLLILDESTAS
LDTVRKYELFNLVQHFNQQHDLTVISVTHDFDLMQRYSNRYLMLKEDHYALGEVADIKNEEDLLDV

Sequences:

>Translated_226_residues
MTETLVQVQKLAMDFPGQKLFNNLSFDVDRRDFLSIIGENGVGKTTLIRALLNQVKPTSGSIKFRKGTKVGYVPQFRNIE
RDYPLSIRDFVALNLQNGKMPWLSKMERTQLDEILEETDLVDIQNTRIGRASGGQKQKAYLAQALVDNPDLLILDESTAS
LDTVRKYELFNLVQHFNQQHDLTVISVTHDFDLMQRYSNRYLMLKEDHYALGEVADIKNEEDLLDV
>Mature_225_residues
TETLVQVQKLAMDFPGQKLFNNLSFDVDRRDFLSIIGENGVGKTTLIRALLNQVKPTSGSIKFRKGTKVGYVPQFRNIER
DYPLSIRDFVALNLQNGKMPWLSKMERTQLDEILEETDLVDIQNTRIGRASGGQKQKAYLAQALVDNPDLLILDESTASL
DTVRKYELFNLVQHFNQQHDLTVISVTHDFDLMQRYSNRYLMLKEDHYALGEVADIKNEEDLLDV

Specific function: Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system [H]

COG id: COG1121

COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=215, Percent_Identity=29.3023255813954, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI27262624, Length=182, Percent_Identity=29.1208791208791, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI27262626, Length=182, Percent_Identity=29.1208791208791, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI30795238, Length=210, Percent_Identity=24.2857142857143, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI27881501, Length=210, Percent_Identity=24.2857142857143, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI153792144, Length=164, Percent_Identity=30.4878048780488, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI90421313, Length=208, Percent_Identity=24.0384615384615, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI27477115, Length=186, Percent_Identity=25.2688172043011, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI73747915, Length=236, Percent_Identity=25.4237288135593, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27881506, Length=197, Percent_Identity=27.9187817258883, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI148612853, Length=176, Percent_Identity=30.1136363636364, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI10947137, Length=197, Percent_Identity=27.9187817258883, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1788165, Length=219, Percent_Identity=28.7671232876712, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=26.6666666666667, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=30.3921568627451, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1789891, Length=202, Percent_Identity=30.6930693069307, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1789864, Length=248, Percent_Identity=26.6129032258064, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787758, Length=250, Percent_Identity=24.8, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=24.3362831858407, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787164, Length=218, Percent_Identity=29.3577981651376, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786398, Length=198, Percent_Identity=30.3030303030303, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=25.5506607929515, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1790739, Length=220, Percent_Identity=24.0909090909091, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787500, Length=209, Percent_Identity=26.7942583732057, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1788506, Length=248, Percent_Identity=26.6129032258064, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1786563, Length=196, Percent_Identity=29.0816326530612, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787041, Length=197, Percent_Identity=28.4263959390863, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789962, Length=210, Percent_Identity=24.2857142857143, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=29.7979797979798, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1789991, Length=212, Percent_Identity=30.6603773584906, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786253, Length=193, Percent_Identity=25.3886010362694, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790544, Length=233, Percent_Identity=24.4635193133047, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI48994943, Length=217, Percent_Identity=25.3456221198157, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=25.1082251082251, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=25.2252252252252, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787370, Length=210, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=25.3393665158371, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI2367384, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788450, Length=232, Percent_Identity=26.7241379310345, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786319, Length=195, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI145693107, Length=243, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=22.8310502283105, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081782, Length=201, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787712, Length=180, Percent_Identity=28.8888888888889, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI87082268, Length=223, Percent_Identity=23.7668161434978, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=24.3119266055046, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788472, Length=224, Percent_Identity=23.6607142857143, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1790190, Length=216, Percent_Identity=26.8518518518519, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=226, Percent_Identity=28.3185840707965, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789593, Length=213, Percent_Identity=22.5352112676056, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789751, Length=192, Percent_Identity=28.125, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787182, Length=175, Percent_Identity=31.4285714285714, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1787089, Length=205, Percent_Identity=24.390243902439, Blast_Score=60, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=224, Percent_Identity=24.5535714285714, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115534520, Length=229, Percent_Identity=26.6375545851528, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17559834, Length=181, Percent_Identity=30.3867403314917, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17569081, Length=212, Percent_Identity=28.3018867924528, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=199, Percent_Identity=26.1306532663317, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25146765, Length=147, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71992070, Length=147, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71992066, Length=147, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI86564969, Length=147, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=240, Percent_Identity=25, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=186, Percent_Identity=26.8817204301075, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321121, Length=198, Percent_Identity=24.7474747474747, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24650853, Length=187, Percent_Identity=26.7379679144385, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650855, Length=187, Percent_Identity=26.7379679144385, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281362751, Length=190, Percent_Identity=27.3684210526316, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574259, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582014, Length=181, Percent_Identity=24.8618784530387, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=181, Percent_Identity=24.8618784530387, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653245, Length=181, Percent_Identity=27.6243093922652, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281363262, Length=181, Percent_Identity=27.6243093922652, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574744, Length=191, Percent_Identity=31.413612565445, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581191, Length=160, Percent_Identity=28.125, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24581189, Length=160, Percent_Identity=28.125, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24581193, Length=160, Percent_Identity=28.125, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24581195, Length=160, Percent_Identity=28.125, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017882
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25954; Mature: 25823

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETLVQVQKLAMDFPGQKLFNNLSFDVDRRDFLSIIGENGVGKTTLIRALLNQVKPTSG
CCHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
SIKFRKGTKVGYVPQFRNIERDYPLSIRDFVALNLQNGKMPWLSKMERTQLDEILEETDL
CEEEECCCCCCCCCCHHCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
VDIQNTRIGRASGGQKQKAYLAQALVDNPDLLILDESTASLDTVRKYELFNLVQHFNQQH
EECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
DLTVISVTHDFDLMQRYSNRYLMLKEDHYALGEVADIKNEEDLLDV
CEEEEEEECCHHHHHHHCCCEEEEECCCCCHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
TETLVQVQKLAMDFPGQKLFNNLSFDVDRRDFLSIIGENGVGKTTLIRALLNQVKPTSG
CHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
SIKFRKGTKVGYVPQFRNIERDYPLSIRDFVALNLQNGKMPWLSKMERTQLDEILEETDL
CEEEECCCCCCCCCCHHCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
VDIQNTRIGRASGGQKQKAYLAQALVDNPDLLILDESTASLDTVRKYELFNLVQHFNQQH
EECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
DLTVISVTHDFDLMQRYSNRYLMLKEDHYALGEVADIKNEEDLLDV
CEEEEEEECCHHHHHHHCCCEEEEECCCCCHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA