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The map label for this gene is 116332543

Identifier: 116332543

GI number: 116332543

Start: 125632

End: 127758

Strand: Direct

Name: 116332543

Synonym: LBJ_4109

Alternate gene names: NA

Gene position: 125632-127758 (Clockwise)

Preceding gene: 116332542

Following gene: 116332544

Centisome position: 41.91

GC content: 38.69

Gene sequence:

>2127_bases
GTGATTTTCGAGCTTCGGAAATCTAAGACCATTTTCTTTTTGATTTTGGCTTGGTCCGGAGCTTTTTTCGCGATTCATTC
CGAACCGTCCGCCGAATTCGAACCGAATGCGGTAATGAAAGGATGGAATCTGCAACCGTATCTAACGTATTACGAAGACA
AATCGGGGGAACTTTCTTTTTCCGAGATTCAAAGTATCTTTCGGTCTGGGAAATCGATTCCGCTGTTCAATACTAACCTC
GGATACTCTGATGCAACGATTTGGGTTCGGATTCCGGTTTCTAATTCGGAAAAGAGAACAAAAAATTGGGTTCTTCTATT
CTCTTATTGTCTGATCGACTCTTTGCAGTTTTATTCCGTTCGAAACGGGCTTTCACCTCTGGTGGTTTCCGGAGATAAAC
TTCCGTTTGCAACGAGACTTGCAGAAAATCGGAATTTCCCATTTCAATTGAGCGAACCTCCTCTTTCCAAAAATGACTAT
TATATTCGAATCGAATCCAAAAATTCGCTTATTATTCCCTTATCCGCGTATTCACGGACCCAGTTTTTGGAGCAAACCGC
GAAAGAATATACCGTCCTAGGTTTGTACTACGGAACGATGTTTGTGATGTTTATTTACAATCTGTTTCTTTTGATTACGA
TTCGAGATATAAGTTATCTTTATTATAGTATATTCATATTTTTTGATATTCTGTTCCAAATGACTCTGAACGGTTTGTCC
TTTCAGTTTTTATGGCCTAATAATCCAAGATGGGGGAACGTAAGTCTTCCGTTTTTTATGTTTTCCGCGCTTCTTGCGGC
GTGTTTGTTTGGAAAATCCTTTTTGGAATCTTCTAAAATGACTCCGATCACGAACAAATTTTATTATCCAATCATAGCGA
TTTGTGGGTTCGGTTGTGTCGGTTCTTTGACTTTTTTCACTTATACGTTCAGCGTGATTTCAAGTATTATCGTTCTTTTG
ATTGTTTTAACTTTGCTTTTGACCAACAGTCTTCAATGTGTATGGAAAGGACATCGTCCAGCTCGATTTTTCCTAATGGC
TTGGTCCGTTTTGATTTTTGGGAGTTTTTTGTACGCGATGAGTGCCTTTGGAGTGTTTTCAGATAACTTTTTTACTCAAT
GGGGCTTGCAGATTGGATCCGCGATTGAAGTCGCTCTTCTTTCTTTGGGATTGGCAGACCGGATCAAACAACTTTCCTTA
ACTTTAGAAATGCAAATGACTAGTTTAGGCCTTTTAAAGCAAAGACACGAACAATCTGCAGTTCAGTATAAAAATTTATA
CGAAGGCGAGGAAGATTTTCTTTTCGATTTGGATTTCAACGGAACGATTACAGGAAGTAATAAGTCTATCTCTACGTTTT
TAGGTTTTAAATCGCAGGATGTGATCGGTAAAAATTTTTTTGATCTAGTGTATAAAACAGGGAGTTTGGAGGACGTATTC
AAGAAATTGTATGTAATGGAAAAGATGGAAGAGTTGTATTCCACGAGGAAACCAGTTTATTTCCGAGTCGATTTCGTTCA
GAAATATCTGAAGGAGCCGAAAGAGTTACAGGTTCGCCTTCAAGTTTTGGAGCACAAATATGGTCGCGATATCTTAGGAA
GAGCTTTTGAACCGGATCGGGATCTGATAGGGAGATTTCTAGATGAGGAAAGAATCGTGTTCTCAATGGACAATTCTCTT
CAAAACGCGGAACTTCTGAGTCAGAGACTTACGTTTAATCTTATACGTTTTACTAATCCTGCTGTGGTTCTTTCGATTCG
GACGGGCCTTAGAGAAATACTCGTCAACTCGATTGAGCACGGAAATCTTAATATATCCGACGAAGATAAAACCAGATCCT
TAAAAAGTGGAAATTATTTTCAATTTATCCTAACTCGTCAGAATGATTCACATTACAGGGATAAAAAAATTCTCGTGGAA
TATTTTCTCTCCAGTCAAAAGGTGGGTTATAGAATTACGGATGAAGGGAAAGGATTCAATCACGCGAGAATTGTTCGGAA
TGCTCTTTCTAAAACGAATGAAAATACGACTTTACGGACTAGAGGAATCGCGTTTGCACTTTCCACTTTCGACGTAGTGA
AATTCAATTCTACAGGAAACCGAGTCACCTTGGTTAAGTATTTCTAA

Upstream 100 bases:

>100_bases
TGATTCGTATCTTTCTTGTGTTTATGCTTCCTCAAATAGGGAGTAGTATCGGTACGTTTATTGTAACTGCAGACTTATTC
CGAGTTCTTAAGGGATTGAT

Downstream 100 bases:

>100_bases
ATGAAACATTTTATTTTTGTAATATTATTTCTTTTGTTATTTTTCGTAGATTGTACGGTTGCAGGACGTTCTTCGAAGAA
GAATCTTCCGAAACCTTTAG

Product: Signal transduction protein

Products: NA

Alternate protein names: Sensor Histidine Kinase; Diverse 7TM Receptor Transmembrane Region; Response Regulator; Periplasmic/7TM Domain Sensor Diguanylate Cyclase; Sensor Histidine Kinase/Response Regulator; GGDEF Domain-Containing Protein; Phosphoserine Phosphatase; Signal Transduction Protein; Signal Transduction Histidine Kinase; Adenylate/Guanylate Cyclase; Response Regulator Receiver Domain-Containing Protein; Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Response Regulator Receiver; Multi-Sensor Signal Transduction Multi-Kinase; Signal Protein; Two-Component Sensor; Integral Membrane Sensor Hybrid Histidine Kinase; 7TM Diverse Intracellular Signalling Domain Protein; Protein Serine/Threonine Phosphatase; Serine Phosphatase; Response Regulator Receiver Modulated Serine Phosphatase; PAS Sensor Protein; Sensor Diguanylate Cyclase; Phosphoserine Phosphatase RsbP; Two-Component Sensor Histidine Kinase; Sensor Protein; Sensor/Response Regulator Hybrid; 7TM Receptor Family Protein; AraC Family Transcriptional Regulator; Lost Adherence Sensor LadS; Two-Component System Sensor Kinase; Two-Component Sensor Histdine Kinase; Integral Membrane Hybrid Histidine Protein Kinase; Sensor Protein BarA; Sensory Transduction Histidine Kinase; Sensor/Response Regulator Hybrid Protein; Phosphoglycerate Transport; Transmembrane Signal Transduction Protein; Sensor Protein For Response Regulator AtoC; Signaling Protein With A Acyltransferase And GGDEF Domains; Periplasmic Sensor Hybrid Histidine Kinase; Diverse 7tm Receptor Transmembrane Region; Methyl-Accepting Chemotaxis Sensory Transducer; Response Regulator Receiver Protein; Chromosome Segregation ATPase; ATPase Histidine Kinase- DNA Gyrase B- And

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
MIFELRKSKTIFFLILAWSGAFFAIHSEPSAEFEPNAVMKGWNLQPYLTYYEDKSGELSFSEIQSIFRSGKSIPLFNTNL
GYSDATIWVRIPVSNSEKRTKNWVLLFSYCLIDSLQFYSVRNGLSPLVVSGDKLPFATRLAENRNFPFQLSEPPLSKNDY
YIRIESKNSLIIPLSAYSRTQFLEQTAKEYTVLGLYYGTMFVMFIYNLFLLITIRDISYLYYSIFIFFDILFQMTLNGLS
FQFLWPNNPRWGNVSLPFFMFSALLAACLFGKSFLESSKMTPITNKFYYPIIAICGFGCVGSLTFFTYTFSVISSIIVLL
IVLTLLLTNSLQCVWKGHRPARFFLMAWSVLIFGSFLYAMSAFGVFSDNFFTQWGLQIGSAIEVALLSLGLADRIKQLSL
TLEMQMTSLGLLKQRHEQSAVQYKNLYEGEEDFLFDLDFNGTITGSNKSISTFLGFKSQDVIGKNFFDLVYKTGSLEDVF
KKLYVMEKMEELYSTRKPVYFRVDFVQKYLKEPKELQVRLQVLEHKYGRDILGRAFEPDRDLIGRFLDEERIVFSMDNSL
QNAELLSQRLTFNLIRFTNPAVVLSIRTGLREILVNSIEHGNLNISDEDKTRSLKSGNYFQFILTRQNDSHYRDKKILVE
YFLSSQKVGYRITDEGKGFNHARIVRNALSKTNENTTLRTRGIAFALSTFDVVKFNSTGNRVTLVKYF

Sequences:

>Translated_708_residues
MIFELRKSKTIFFLILAWSGAFFAIHSEPSAEFEPNAVMKGWNLQPYLTYYEDKSGELSFSEIQSIFRSGKSIPLFNTNL
GYSDATIWVRIPVSNSEKRTKNWVLLFSYCLIDSLQFYSVRNGLSPLVVSGDKLPFATRLAENRNFPFQLSEPPLSKNDY
YIRIESKNSLIIPLSAYSRTQFLEQTAKEYTVLGLYYGTMFVMFIYNLFLLITIRDISYLYYSIFIFFDILFQMTLNGLS
FQFLWPNNPRWGNVSLPFFMFSALLAACLFGKSFLESSKMTPITNKFYYPIIAICGFGCVGSLTFFTYTFSVISSIIVLL
IVLTLLLTNSLQCVWKGHRPARFFLMAWSVLIFGSFLYAMSAFGVFSDNFFTQWGLQIGSAIEVALLSLGLADRIKQLSL
TLEMQMTSLGLLKQRHEQSAVQYKNLYEGEEDFLFDLDFNGTITGSNKSISTFLGFKSQDVIGKNFFDLVYKTGSLEDVF
KKLYVMEKMEELYSTRKPVYFRVDFVQKYLKEPKELQVRLQVLEHKYGRDILGRAFEPDRDLIGRFLDEERIVFSMDNSL
QNAELLSQRLTFNLIRFTNPAVVLSIRTGLREILVNSIEHGNLNISDEDKTRSLKSGNYFQFILTRQNDSHYRDKKILVE
YFLSSQKVGYRITDEGKGFNHARIVRNALSKTNENTTLRTRGIAFALSTFDVVKFNSTGNRVTLVKYF
>Mature_708_residues
MIFELRKSKTIFFLILAWSGAFFAIHSEPSAEFEPNAVMKGWNLQPYLTYYEDKSGELSFSEIQSIFRSGKSIPLFNTNL
GYSDATIWVRIPVSNSEKRTKNWVLLFSYCLIDSLQFYSVRNGLSPLVVSGDKLPFATRLAENRNFPFQLSEPPLSKNDY
YIRIESKNSLIIPLSAYSRTQFLEQTAKEYTVLGLYYGTMFVMFIYNLFLLITIRDISYLYYSIFIFFDILFQMTLNGLS
FQFLWPNNPRWGNVSLPFFMFSALLAACLFGKSFLESSKMTPITNKFYYPIIAICGFGCVGSLTFFTYTFSVISSIIVLL
IVLTLLLTNSLQCVWKGHRPARFFLMAWSVLIFGSFLYAMSAFGVFSDNFFTQWGLQIGSAIEVALLSLGLADRIKQLSL
TLEMQMTSLGLLKQRHEQSAVQYKNLYEGEEDFLFDLDFNGTITGSNKSISTFLGFKSQDVIGKNFFDLVYKTGSLEDVF
KKLYVMEKMEELYSTRKPVYFRVDFVQKYLKEPKELQVRLQVLEHKYGRDILGRAFEPDRDLIGRFLDEERIVFSMDNSL
QNAELLSQRLTFNLIRFTNPAVVLSIRTGLREILVNSIEHGNLNISDEDKTRSLKSGNYFQFILTRQNDSHYRDKKILVE
YFLSSQKVGYRITDEGKGFNHARIVRNALSKTNENTTLRTRGIAFALSTFDVVKFNSTGNRVTLVKYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81716; Mature: 81716

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFELRKSKTIFFLILAWSGAFFAIHSEPSAEFEPNAVMKGWNLQPYLTYYEDKSGELSF
CEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCH
SEIQSIFRSGKSIPLFNTNLGYSDATIWVRIPVSNSEKRTKNWVLLFSYCLIDSLQFYSV
HHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHH
RNGLSPLVVSGDKLPFATRLAENRNFPFQLSEPPLSKNDYYIRIESKNSLIIPLSAYSRT
HCCCCCEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCEEEEECHHHHH
QFLEQTAKEYTVLGLYYGTMFVMFIYNLFLLITIRDISYLYYSIFIFFDILFQMTLNGLS
HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FQFLWPNNPRWGNVSLPFFMFSALLAACLFGKSFLESSKMTPITNKFYYPIIAICGFGCV
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHH
GSLTFFTYTFSVISSIIVLLIVLTLLLTNSLQCVWKGHRPARFFLMAWSVLIFGSFLYAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SAFGVFSDNFFTQWGLQIGSAIEVALLSLGLADRIKQLSLTLEMQMTSLGLLKQRHEQSA
HHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHH
VQYKNLYEGEEDFLFDLDFNGTITGSNKSISTFLGFKSQDVIGKNFFDLVYKTGSLEDVF
HHHHHHCCCCCCEEEEECCCCEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCHHHHH
KKLYVMEKMEELYSTRKPVYFRVDFVQKYLKEPKELQVRLQVLEHKYGRDILGRAFEPDR
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCCCH
DLIGRFLDEERIVFSMDNSLQNAELLSQRLTFNLIRFTNPAVVLSIRTGLREILVNSIEH
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECCCEEEEEEHHHHHHHHHHCCCC
GNLNISDEDKTRSLKSGNYFQFILTRQNDSHYRDKKILVEYFLSSQKVGYRITDEGKGFN
CCCCCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCC
HARIVRNALSKTNENTTLRTRGIAFALSTFDVVKFNSTGNRVTLVKYF
HHHHHHHHHHCCCCCCEEEECCEEEEEEEEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MIFELRKSKTIFFLILAWSGAFFAIHSEPSAEFEPNAVMKGWNLQPYLTYYEDKSGELSF
CEEEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCH
SEIQSIFRSGKSIPLFNTNLGYSDATIWVRIPVSNSEKRTKNWVLLFSYCLIDSLQFYSV
HHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHH
RNGLSPLVVSGDKLPFATRLAENRNFPFQLSEPPLSKNDYYIRIESKNSLIIPLSAYSRT
HCCCCCEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCEEEEECHHHHH
QFLEQTAKEYTVLGLYYGTMFVMFIYNLFLLITIRDISYLYYSIFIFFDILFQMTLNGLS
HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FQFLWPNNPRWGNVSLPFFMFSALLAACLFGKSFLESSKMTPITNKFYYPIIAICGFGCV
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHH
GSLTFFTYTFSVISSIIVLLIVLTLLLTNSLQCVWKGHRPARFFLMAWSVLIFGSFLYAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SAFGVFSDNFFTQWGLQIGSAIEVALLSLGLADRIKQLSLTLEMQMTSLGLLKQRHEQSA
HHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHH
VQYKNLYEGEEDFLFDLDFNGTITGSNKSISTFLGFKSQDVIGKNFFDLVYKTGSLEDVF
HHHHHHCCCCCCEEEEECCCCEEECCCCCCHHHHCCCCCCCCCCHHHHHHCCCCCHHHHH
KKLYVMEKMEELYSTRKPVYFRVDFVQKYLKEPKELQVRLQVLEHKYGRDILGRAFEPDR
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCCCH
DLIGRFLDEERIVFSMDNSLQNAELLSQRLTFNLIRFTNPAVVLSIRTGLREILVNSIEH
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECCCEEEEEEHHHHHHHHHHCCCC
GNLNISDEDKTRSLKSGNYFQFILTRQNDSHYRDKKILVEYFLSSQKVGYRITDEGKGFN
CCCCCCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCC
HARIVRNALSKTNENTTLRTRGIAFALSTFDVVKFNSTGNRVTLVKYF
HHHHHHHHHHCCCCCCEEEECCEEEEEEEEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA