Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
---|---|
Accession | NC_008511 |
Length | 299,762 |
Click here to switch to the map view.
The map label for this gene is 116332537
Identifier: 116332537
GI number: 116332537
Start: 116452
End: 117552
Strand: Direct
Name: 116332537
Synonym: LBJ_4101
Alternate gene names: NA
Gene position: 116452-117552 (Clockwise)
Preceding gene: 116332536
Following gene: 116332542
Centisome position: 38.85
GC content: 43.78
Gene sequence:
>1101_bases ATGGCAAAAAAAACATCCACGGTAAAAGGGATTTCCAAGACGAAGAAAGATTCTTCGATTCGATCCATCAACGATTTTTT AGGTTCTAGGGATCTACCTCACCCGGTAGATCGTCTGGAAGACGTTCGAAGAAGAGCTCGCAAATTTCGGGAGAAGATGC TCTCCGGTCCTCAAGTGATTTTTTACAGGTCTTACGATTTAATCAGAGTTCCTTATCCTACACGTTATGCACTTTTAAAT GCTTATAATCTTCCAACTCCGTACATGCATATTCTCAATCGATTATTCATCGTCCAATATAAAACTCAGGAAGGAATCAA AACGCTTTTATTTTCTCCTTCGGATTTGGATGGAAATACGGAGACCCCGTTTTTTAAAAGACTTTCCGAATCTTTCGGAC CGTTTCAATCCATCGGAAGAAAGATCATCGCACCGATTTTAAGCACAGTGGAAGAATGTCTGAAAGACGCGGGGATTTCT CCCGAAAAAGTCGATTATATTTCTTATGATCACCTTCATACGCAGGATATCCGTAAGTGGTTGGGAGCAAACGGAGAAAA AGGCTACTTCCCGAACGCAAAACTTTTGGTAATGAGACAAGAATGGGATTCGGTTCAGGGACTTCTTCCTCCGCAAGCCG ATTGGTATTGTCCGAATGGAACCGGAGGAGTCGCAAGTGATCGGATTCTGGTCTTGGACGGAGACGTTTCGTTGGGACAA GGAATCGCTTTGATACGTACTCCGGGACATACTGCGGGAAACCATTCTCTTGTGGCTCATACTCCCGAGGGAATTTTTGT TTCGAGCGAGAACGGGGTTAGTGCAGATAGTTATTCTCCGTTAAAGTCCCGGATCCCGGGAGTAAAAAAATATGCGAAGA CGACCGGTATGGAAGTCATCTTAAACGGAAACACGCTCGAAAGCGGGTTGGAGCAATATATTTCCATGGTTCAAGAAAAA GAAATGGCGGGAATTTCTTCCAGGAATTCGGACTTTTACAACGTTATGCCTTCTTCGGAAATGACAAGTTACTGGTTGTT TCCAGGGACGGCCCCTACTTTTAGTTTCGGAAGATTGTCTTTCGGTTCTCCGGTGATTTAA
Upstream 100 bases:
>100_bases TGTAATGTATGTCGCAATTTACAAACCGTTTTGATTTCTATTCACCTTCGAAAATGAAACTAAGAAGTATAATCTAAAAC ATCTAAGGGGATTAAAAAAT
Downstream 100 bases:
>100_bases GGGAAATGAAAAATGATTTTATTCATCACAGGTTGTGCGGGTGGCCTTGGAAAAAAATTAGCAGGAGAAGCTTTTACCGC CGGGCATTCGATTTTAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MAKKTSTVKGISKTKKDSSIRSINDFLGSRDLPHPVDRLEDVRRRARKFREKMLSGPQVIFYRSYDLIRVPYPTRYALLN AYNLPTPYMHILNRLFIVQYKTQEGIKTLLFSPSDLDGNTETPFFKRLSESFGPFQSIGRKIIAPILSTVEECLKDAGIS PEKVDYISYDHLHTQDIRKWLGANGEKGYFPNAKLLVMRQEWDSVQGLLPPQADWYCPNGTGGVASDRILVLDGDVSLGQ GIALIRTPGHTAGNHSLVAHTPEGIFVSSENGVSADSYSPLKSRIPGVKKYAKTTGMEVILNGNTLESGLEQYISMVQEK EMAGISSRNSDFYNVMPSSEMTSYWLFPGTAPTFSFGRLSFGSPVI
Sequences:
>Translated_366_residues MAKKTSTVKGISKTKKDSSIRSINDFLGSRDLPHPVDRLEDVRRRARKFREKMLSGPQVIFYRSYDLIRVPYPTRYALLN AYNLPTPYMHILNRLFIVQYKTQEGIKTLLFSPSDLDGNTETPFFKRLSESFGPFQSIGRKIIAPILSTVEECLKDAGIS PEKVDYISYDHLHTQDIRKWLGANGEKGYFPNAKLLVMRQEWDSVQGLLPPQADWYCPNGTGGVASDRILVLDGDVSLGQ GIALIRTPGHTAGNHSLVAHTPEGIFVSSENGVSADSYSPLKSRIPGVKKYAKTTGMEVILNGNTLESGLEQYISMVQEK EMAGISSRNSDFYNVMPSSEMTSYWLFPGTAPTFSFGRLSFGSPVI >Mature_365_residues AKKTSTVKGISKTKKDSSIRSINDFLGSRDLPHPVDRLEDVRRRARKFREKMLSGPQVIFYRSYDLIRVPYPTRYALLNA YNLPTPYMHILNRLFIVQYKTQEGIKTLLFSPSDLDGNTETPFFKRLSESFGPFQSIGRKIIAPILSTVEECLKDAGISP EKVDYISYDHLHTQDIRKWLGANGEKGYFPNAKLLVMRQEWDSVQGLLPPQADWYCPNGTGGVASDRILVLDGDVSLGQG IALIRTPGHTAGNHSLVAHTPEGIFVSSENGVSADSYSPLKSRIPGVKKYAKTTGMEVILNGNTLESGLEQYISMVQEKE MAGISSRNSDFYNVMPSSEMTSYWLFPGTAPTFSFGRLSFGSPVI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40821; Mature: 40690
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTSTVKGISKTKKDSSIRSINDFLGSRDLPHPVDRLEDVRRRARKFREKMLSGPQVI CCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE FYRSYDLIRVPYPTRYALLNAYNLPTPYMHILNRLFIVQYKTQEGIKTLLFSPSDLDGNT EEECCCEEECCCCCHHHHEECCCCCCHHHHHHHHHHEEEECCHHCHHHHEECCCCCCCCC ETPFFKRLSESFGPFQSIGRKIIAPILSTVEECLKDAGISPEKVDYISYDHLHTQDIRKW CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH LGANGEKGYFPNAKLLVMRQEWDSVQGLLPPQADWYCPNGTGGVASDRILVLDGDVSLGQ HCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCC GIALIRTPGHTAGNHSLVAHTPEGIFVSSENGVSADSYSPLKSRIPGVKKYAKTTGMEVI CEEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHCCCEEE LNGNTLESGLEQYISMVQEKEMAGISSRNSDFYNVMPSSEMTSYWLFPGTAPTFSFGRLS ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCC FGSPVI CCCCCC >Mature Secondary Structure AKKTSTVKGISKTKKDSSIRSINDFLGSRDLPHPVDRLEDVRRRARKFREKMLSGPQVI CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE FYRSYDLIRVPYPTRYALLNAYNLPTPYMHILNRLFIVQYKTQEGIKTLLFSPSDLDGNT EEECCCEEECCCCCHHHHEECCCCCCHHHHHHHHHHEEEECCHHCHHHHEECCCCCCCCC ETPFFKRLSESFGPFQSIGRKIIAPILSTVEECLKDAGISPEKVDYISYDHLHTQDIRKW CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH LGANGEKGYFPNAKLLVMRQEWDSVQGLLPPQADWYCPNGTGGVASDRILVLDGDVSLGQ HCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCC GIALIRTPGHTAGNHSLVAHTPEGIFVSSENGVSADSYSPLKSRIPGVKKYAKTTGMEVI CEEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHCCHHHHHHHHCCCEEE LNGNTLESGLEQYISMVQEKEMAGISSRNSDFYNVMPSSEMTSYWLFPGTAPTFSFGRLS ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCC FGSPVI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA