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The map label for this gene is scpA [H]

Identifier: 116328729

GI number: 116328729

Start: 2462136

End: 2462921

Strand: Reverse

Name: scpA [H]

Synonym: LBL_2103

Alternate gene names: 116328729

Gene position: 2462921-2462136 (Counterclockwise)

Preceding gene: 116328730

Following gene: 116328728

Centisome position: 68.14

GC content: 43.13

Gene sequence:

>786_bases
ATGGAGAATGAAGAATCCGGTAACTCCTTTGTAGTTCAATGGAACAATTCGGAAGGCGGTTTGTCGGAAGGGCCTTTATC
CGTTCTCTGGAGTTTGATTGAAAGCTACAAAGTGGACATTTTCGATGTTTCTCTCTCTCGCATCACCCGTGATTTTTTAA
ATTTCCTACGTATTTCCGAAACTCTGTCTTTAGAATTGAGCGCCGAATACGCTTTGATGGCCGCTAATTTGATCTATCTA
AAATCTAAGGCTTTGTTGCCCGATCCCGGGTTCGAAGAAGAAGACTACGAACCTCCGCTTCCTCCGGAGCTAGTTGAAAA
ACTTTTAGAGCACAAAAAATTTCAACTCACGGCTAAAAAACTTTCAGAAATGGATCAGATCCAAACCGGAGTTTTTAGAA
GGGAATCCGACGTCACCTTGGACGAAGAGGATCATTGGCTCGACGTTTCCCTCTTGGATCTGATTTCGGCCTTTCATGAA
ATTTTGGAATCCCAATCGACAGAGATTGAAATTCCTACCTTACTCACCACACCACACCGTTTTACGGTGGAAGAAAAGAT
GGAAAGTATCCTTTCCTCTCTTCGGAAAAAGAAAGAAGTTTCTTTTCCGGAATTATTCGAACGGGAACGGCCTGAAAAAG
CAGAAATCGTTGCCACTTTTCTGGCATTGCTGGAACTAAGTAAGCAGAGAATTCTCCGTGCGAAACAGTACAAGTTGTTC
GGAGAAATCCGTCTATTTCTGAACGAGGGACATTGGAACGGGACAGAACAGCAATCAAAGGATTGA

Upstream 100 bases:

>100_bases
AAAATGGGTGTGAAGGATTTTGTCGTAAAACCATTTTCTCCGGAAAGACTGCAACAAGCGGCGGACAAAGCGCTCAATTC
GTAAGGTAGATTTCTTTTGA

Downstream 100 bases:

>100_bases
TCGAGGCCTTACTTTTTGTTTCCGGTGAACCCTTAAAATTGGCGAGTATCGCTAAGTCTGCAGGGATCGAAAAAATAGAC
GCCCGAGAAATTTTGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MENEESGNSFVVQWNNSEGGLSEGPLSVLWSLIESYKVDIFDVSLSRITRDFLNFLRISETLSLELSAEYALMAANLIYL
KSKALLPDPGFEEEDYEPPLPPELVEKLLEHKKFQLTAKKLSEMDQIQTGVFRRESDVTLDEEDHWLDVSLLDLISAFHE
ILESQSTEIEIPTLLTTPHRFTVEEKMESILSSLRKKKEVSFPELFERERPEKAEIVATFLALLELSKQRILRAKQYKLF
GEIRLFLNEGHWNGTEQQSKD

Sequences:

>Translated_261_residues
MENEESGNSFVVQWNNSEGGLSEGPLSVLWSLIESYKVDIFDVSLSRITRDFLNFLRISETLSLELSAEYALMAANLIYL
KSKALLPDPGFEEEDYEPPLPPELVEKLLEHKKFQLTAKKLSEMDQIQTGVFRRESDVTLDEEDHWLDVSLLDLISAFHE
ILESQSTEIEIPTLLTTPHRFTVEEKMESILSSLRKKKEVSFPELFERERPEKAEIVATFLALLELSKQRILRAKQYKLF
GEIRLFLNEGHWNGTEQQSKD
>Mature_261_residues
MENEESGNSFVVQWNNSEGGLSEGPLSVLWSLIESYKVDIFDVSLSRITRDFLNFLRISETLSLELSAEYALMAANLIYL
KSKALLPDPGFEEEDYEPPLPPELVEKLLEHKKFQLTAKKLSEMDQIQTGVFRRESDVTLDEEDHWLDVSLLDLISAFHE
ILESQSTEIEIPTLLTTPHRFTVEEKMESILSSLRKKKEVSFPELFERERPEKAEIVATFLALLELSKQRILRAKQYKLF
GEIRLFLNEGHWNGTEQQSKD

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30182; Mature: 30182

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEESGNSFVVQWNNSEGGLSEGPLSVLWSLIESYKVDIFDVSLSRITRDFLNFLRISE
CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHH
TLSLELSAEYALMAANLIYLKSKALLPDPGFEEEDYEPPLPPELVEKLLEHKKFQLTAKK
HHEEEECHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSEMDQIQTGVFRRESDVTLDEEDHWLDVSLLDLISAFHEILESQSTEIEIPTLLTTPHR
HHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEECCEEEECCCC
FTVEEKMESILSSLRKKKEVSFPELFERERPEKAEIVATFLALLELSKQRILRAKQYKLF
CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIRLFLNEGHWNGTEQQSKD
HHHHEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MENEESGNSFVVQWNNSEGGLSEGPLSVLWSLIESYKVDIFDVSLSRITRDFLNFLRISE
CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHH
TLSLELSAEYALMAANLIYLKSKALLPDPGFEEEDYEPPLPPELVEKLLEHKKFQLTAKK
HHEEEECHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSEMDQIQTGVFRRESDVTLDEEDHWLDVSLLDLISAFHEILESQSTEIEIPTLLTTPHR
HHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEECCEEEECCCC
FTVEEKMESILSSLRKKKEVSFPELFERERPEKAEIVATFLALLELSKQRILRAKQYKLF
CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIRLFLNEGHWNGTEQQSKD
HHHHEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA