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The map label for this gene is rpmF

Identifier: 116328720

GI number: 116328720

Start: 2454025

End: 2454225

Strand: Reverse

Name: rpmF

Synonym: LBL_2094

Alternate gene names: 116328720

Gene position: 2454225-2454025 (Counterclockwise)

Preceding gene: 116328721

Following gene: 116328719

Centisome position: 67.9

GC content: 38.81

Gene sequence:

>201_bases
ATGGCAGTTCCCAAAAGACGAAAATCGAAATCAAAAGTTAGAACAAAACGGGCACATCATGCCATCGGAAAGCCGAATTT
GGTTCCTTGTCCTAATTGTAATGTTTACAGGTTACCTCATAGAATTTGTCCTACCTGCGGGTTTTATAAAACCGGAATCG
TTTTAGAGCCGAAAGTCAAGAAGCCAAAAGAAGAAAATTAA

Upstream 100 bases:

>100_bases
CAAAAAGGGTTTCTTCTTCGCATTGGATCGAAATAATAGTTGAGGATTAGTACCCTCAAAAAAGTATTGTTTAACAATTC
AATTTCCCAAGAGGAAAGCA

Downstream 100 bases:

>100_bases
TTCCTATGATGTGGATCGCCGTCGACGTAATGAGCGGCGATTACGGGCCGGAGAAAATTATTGAAGGCGCCGTAAATGCC
GTAAATCAGGATGGGGCTAA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAVPKRRKSKSKVRTKRAHHAIGKPNLVPCPNCNVYRLPHRICPTCGFYKTGIVLEPKVKKPKEEN

Sequences:

>Translated_66_residues
MAVPKRRKSKSKVRTKRAHHAIGKPNLVPCPNCNVYRLPHRICPTCGFYKTGIVLEPKVKKPKEEN
>Mature_65_residues
AVPKRRKSKSKVRTKRAHHAIGKPNLVPCPNCNVYRLPHRICPTCGFYKTGIVLEPKVKKPKEEN

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_LEPBJ (Q04U37)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_800341.1
- ProteinModelPortal:   Q04U37
- SMR:   Q04U37
- STRING:   Q04U37
- GeneID:   4409835
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_0939
- HOGENOM:   HBG728381
- OMA:   HIACPSC
- ProtClustDB:   PRK12286
- BioCyc:   LBOR355277:LBJ_0939-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7550; Mature: 7419

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRKSKSKVRTKRAHHAIGKPNLVPCPNCNVYRLPHRICPTCGFYKTGIVLEPKVK
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCEEECCCCC
KPKEEN
CCCCCC
>Mature Secondary Structure 
AVPKRRKSKSKVRTKRAHHAIGKPNLVPCPNCNVYRLPHRICPTCGFYKTGIVLEPKVK
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCEEECCCCC
KPKEEN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA