Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
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Accession | NC_008508 |
Length | 3,614,446 |
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The map label for this gene is 116328486
Identifier: 116328486
GI number: 116328486
Start: 2137635
End: 2137916
Strand: Reverse
Name: 116328486
Synonym: LBL_1834
Alternate gene names: NA
Gene position: 2137916-2137635 (Counterclockwise)
Preceding gene: 116328487
Following gene: 116328485
Centisome position: 59.15
GC content: 42.91
Gene sequence:
>282_bases ATGTCCCAGTTTAGCGTACTCAATGTAGGATTCGGGAATATCGTTCTGGTTTCTAAGATCGTTAGTATCATTCATTCGGA TTCTGCGTCCGCTAAAAGGATTCGAAACGAGGCTAAGAGCAACAACAGTTTGATCGATGCGACTCAAGGCAAAAAGACCC GTTCGATCATTGTGACCGATAGCAATCATCTTATTCTTTCCAATCTAAGAGTGGAATCTCTTGCCAAAAGAATCGAATCC AGCGATAACTCGATCGCTTCCGAAGAGGAAGATCTAGACTGA
Upstream 100 bases:
>100_bases GAAAATATACTCATGAAGAAATTTCGGAAGTTTTAGATCTGGCGCTCGGCGAGGTGGATATCATTGAAAGATTTAGGTTG GATAGAAATAGGAGGTTTTG
Downstream 100 bases:
>100_bases ATTCTCCCAAACTTTTTGTTCTTTCTTCCGTTGCGGGAGGGGGAAAATCCACACTCATTCAAAAGCTCAGAGAAAAACAT CCCGATATTCTTTTCTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTDSNHLILSNLRVESLAKRIES SDNSIASEEEDLD
Sequences:
>Translated_93_residues MSQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTDSNHLILSNLRVESLAKRIES SDNSIASEEEDLD >Mature_92_residues SQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTDSNHLILSNLRVESLAKRIESS DNSIASEEEDLD
Specific function: Unknown
COG id: COG2052
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0296 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007169 - ProDom: PD063023 [H]
Pfam domain/function: PF04025 DUF370 [H]
EC number: NA
Molecular weight: Translated: 10127; Mature: 9996
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTD CCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEEC SNHLILSNLRVESLAKRIESSDNSIASEEEDLD CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTD CCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEEC SNHLILSNLRVESLAKRIESSDNSIASEEEDLD CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA