Definition Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence.
Accession NC_008508
Length 3,614,446

Click here to switch to the map view.

The map label for this gene is 116328486

Identifier: 116328486

GI number: 116328486

Start: 2137635

End: 2137916

Strand: Reverse

Name: 116328486

Synonym: LBL_1834

Alternate gene names: NA

Gene position: 2137916-2137635 (Counterclockwise)

Preceding gene: 116328487

Following gene: 116328485

Centisome position: 59.15

GC content: 42.91

Gene sequence:

>282_bases
ATGTCCCAGTTTAGCGTACTCAATGTAGGATTCGGGAATATCGTTCTGGTTTCTAAGATCGTTAGTATCATTCATTCGGA
TTCTGCGTCCGCTAAAAGGATTCGAAACGAGGCTAAGAGCAACAACAGTTTGATCGATGCGACTCAAGGCAAAAAGACCC
GTTCGATCATTGTGACCGATAGCAATCATCTTATTCTTTCCAATCTAAGAGTGGAATCTCTTGCCAAAAGAATCGAATCC
AGCGATAACTCGATCGCTTCCGAAGAGGAAGATCTAGACTGA

Upstream 100 bases:

>100_bases
GAAAATATACTCATGAAGAAATTTCGGAAGTTTTAGATCTGGCGCTCGGCGAGGTGGATATCATTGAAAGATTTAGGTTG
GATAGAAATAGGAGGTTTTG

Downstream 100 bases:

>100_bases
ATTCTCCCAAACTTTTTGTTCTTTCTTCCGTTGCGGGAGGGGGAAAATCCACACTCATTCAAAAGCTCAGAGAAAAACAT
CCCGATATTCTTTTCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTDSNHLILSNLRVESLAKRIES
SDNSIASEEEDLD

Sequences:

>Translated_93_residues
MSQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTDSNHLILSNLRVESLAKRIES
SDNSIASEEEDLD
>Mature_92_residues
SQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTDSNHLILSNLRVESLAKRIESS
DNSIASEEEDLD

Specific function: Unknown

COG id: COG2052

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0296 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007169
- ProDom:   PD063023 [H]

Pfam domain/function: PF04025 DUF370 [H]

EC number: NA

Molecular weight: Translated: 10127; Mature: 9996

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTD
CCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEEC
SNHLILSNLRVESLAKRIESSDNSIASEEEDLD
CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQFSVLNVGFGNIVLVSKIVSIIHSDSASAKRIRNEAKSNNSLIDATQGKKTRSIIVTD
CCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEEC
SNHLILSNLRVESLAKRIESSDNSIASEEEDLD
CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA