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The map label for this gene is 116328472

Identifier: 116328472

GI number: 116328472

Start: 2116296

End: 2116862

Strand: Reverse

Name: 116328472

Synonym: LBL_1817

Alternate gene names: NA

Gene position: 2116862-2116296 (Counterclockwise)

Preceding gene: 116328475

Following gene: 116328471

Centisome position: 58.57

GC content: 37.92

Gene sequence:

>567_bases
GTGAATTTTGAATTTCAAGCCGATTTAAAACACAATTCGGATGGAAAAATTCCCAAAGAAACGAGAGCAGTGACTTCTAA
AGCTTGGATCGAATATCAAAAAAGTATAAAGTCGGAAAACCCTTGTTTTGATTTGGCAAGGCGAGGAGACATAGAAGCCT
TAAAGGCACAGATCGGGACGCTGAGGCACGTAGATGAAAAAAACCGAAAGGGTTACACATTATTGATGTTAGCCGCTTAC
AACGGACAAGAAGAAGCGAGTCTTTTTCTAATCTCCCAAGGTGCGGATCCGAATTCCACGGATTTTGAAGGTAATTCTAT
ATTGATGGGAGCGGCATTTAAAGGACATACAAGGATCGTAGAAATCCTTTTAAGCGCCGGGGCCGATAAAAATTATCGAA
ATCCTAAGGGACAAAATGCATTTCAATTTTCTAATATGTTTGGTCGAACAGAAGTCTGCAAACTTCTAAGTGAATCCGAG
TCAACTCGGTTTCAGAGATTATTAACTTTTTTTAAATCTTGGATTTTATATATCATTCAAATTACAAAAGGAGAACACGA
TGAATAA

Upstream 100 bases:

>100_bases
TGATATAATTTTAAAATTAGTTTAAAAATGCATAATTTTGATTTAATTATAAATTAAATTGAAAAATTATACATTTATTT
TTCAATTTAATGGGATTTTG

Downstream 100 bases:

>100_bases
AAAGACTCTTACTACGGCTGGAGGCCATCCGGTCGCACAAAATCAACATTCCATCACGGCTGGACCCAGAGGTCCAGTCC
TTATTCAGGATACTCATCTC

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNFEFQADLKHNSDGKIPKETRAVTSKAWIEYQKSIKSENPCFDLARRGDIEALKAQIGTLRHVDEKNRKGYTLLMLAAY
NGQEEASLFLISQGADPNSTDFEGNSILMGAAFKGHTRIVEILLSAGADKNYRNPKGQNAFQFSNMFGRTEVCKLLSESE
STRFQRLLTFFKSWILYIIQITKGEHDE

Sequences:

>Translated_188_residues
MNFEFQADLKHNSDGKIPKETRAVTSKAWIEYQKSIKSENPCFDLARRGDIEALKAQIGTLRHVDEKNRKGYTLLMLAAY
NGQEEASLFLISQGADPNSTDFEGNSILMGAAFKGHTRIVEILLSAGADKNYRNPKGQNAFQFSNMFGRTEVCKLLSESE
STRFQRLLTFFKSWILYIIQITKGEHDE
>Mature_188_residues
MNFEFQADLKHNSDGKIPKETRAVTSKAWIEYQKSIKSENPCFDLARRGDIEALKAQIGTLRHVDEKNRKGYTLLMLAAY
NGQEEASLFLISQGADPNSTDFEGNSILMGAAFKGHTRIVEILLSAGADKNYRNPKGQNAFQFSNMFGRTEVCKLLSESE
STRFQRLLTFFKSWILYIIQITKGEHDE

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI55741641, Length=107, Percent_Identity=39.2523364485981, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24650843, Length=94, Percent_Identity=37.2340425531915, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 21335; Mature: 21335

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEFQADLKHNSDGKIPKETRAVTSKAWIEYQKSIKSENPCFDLARRGDIEALKAQIGT
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH
LRHVDEKNRKGYTLLMLAAYNGQEEASLFLISQGADPNSTDFEGNSILMGAAFKGHTRIV
HHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHH
EILLSAGADKNYRNPKGQNAFQFSNMFGRTEVCKLLSESESTRFQRLLTFFKSWILYIIQ
HHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHH
ITKGEHDE
HCCCCCCC
>Mature Secondary Structure
MNFEFQADLKHNSDGKIPKETRAVTSKAWIEYQKSIKSENPCFDLARRGDIEALKAQIGT
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH
LRHVDEKNRKGYTLLMLAAYNGQEEASLFLISQGADPNSTDFEGNSILMGAAFKGHTRIV
HHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHH
EILLSAGADKNYRNPKGQNAFQFSNMFGRTEVCKLLSESESTRFQRLLTFFKSWILYIIQ
HHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHH
ITKGEHDE
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]