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The map label for this gene is ycjS [C]

Identifier: 116327889

GI number: 116327889

Start: 1387467

End: 1389113

Strand: Direct

Name: ycjS [C]

Synonym: LBL_1174

Alternate gene names: 116327889

Gene position: 1387467-1389113 (Clockwise)

Preceding gene: 116327888

Following gene: 116327890

Centisome position: 38.39

GC content: 33.39

Gene sequence:

>1647_bases
TTGCCTTTAGGCGGGAAACCTGTTCTTCAATTTTTGGTCGAAAGACTCAAACGTTCCAAGTTTATAGATGAAATCATAAT
TGCGACCTCTTCTAATATTGAAAATGATGCAATTGAAAGTTTGACTAAGGAGATCGGGATTTATTGTTTTCGTGGAAGTG
AGGGCGATGTTTTGAGTCGTGTGATCGGAGCAGCGGATTCTAGGAAAGCTGATATTATCGTTCAATTGACAGGAGATTGT
CCTTTGATGGACCCCGAGTTGATTGATGAATGCGTGAGTAAATATTTAGATGGTGGTTACGATTACGTCGCAAACGAATT
AGTGCGGACTTATCCGATTGGAATGGATGTTGCTGTTTTTTCCTTATCCTTATTAAAAGAAACATATTTGGAAAAGGATC
TTACGGAGATGGACAAAGAGCACGTGACTACTTATATAGTGGAACGGCCGATTCGTTATAAATTGCTGAATGTTCGAGCA
GATAAAGAACAGGACCGTCCGGACCTTCAACTGACTTTGGATACGAAAGAAGATTATTCTACATTGAGTTTTATTGTTGA
TTCTTTATATACGAAAAAAAGTGATTTTAATCTAAGAGATATAATTCAATTTTTAGATCAGCACAAAGAGATTTCTGCAA
TCAATTCAGAAATCAAAAGAAAAAAGAAAGATATCCGTAAGTTAAGTGTTGGTCTCATTGGCCTTGGAAAAATAGCCAGT
GATTATGATTCTGGTATCGACGGCATCGAGATCAATAGTCATACGAAAGCATTTCTTAAAAATGAATTTGCGGAAATCGT
GGTGGTTGCAGATCAGGATATATCGAAAATTCAAAATTTTAAAATGAAATGGGACTTAGAACCGATATCTTTTATTGGTT
TAGATGCATTTTGGGCCTCTGAAATAAATTTAGATCTACTATCCATTTGTTCCAGTACCGCTTCACACTTCGAAATATTG
AAAAAAGCGATGGAGAGAAATATTCCTTATATTTTGTGCGAAAAGCCGATCACCGATAAAGAAGATGAGCTCAATGAAAT
TGCCGAACTTTCTAAAAAATCCAACTCTAAAATCATTGTGAATCATATTCTTCGCTGGGAGCCAGGGGTTGATTCGATTA
AAGAAAAATTAAGCCAAGAGAAGATTCAGAAAGTAATAGTTTTTTACGCTAAGGGTTTTCTCCATAACGGGATTCATGTT
GTAGATTTATCTTTATATTTGTTTGGAAATCCGAAGAAGATAATAAAAAGAAAAGAGCATATTGATGGATTTGGATATTT
AAATTTTGATTTCGATTTAGTATATGATAGTTTTGAAATTTCTTTTTTTGCTTTAGATGAAGAGAAATTTAGTATTTTTG
AATATTCTATTTATACGGATTTGGGTAAATTTGTTATAGATGAGTTAACTTCAAAAATAAAATACTTTTCAATTATAAAA
CATCCGAATATCGAAGGGTATCAATATATTGGTTCTAAAGCAGAAGAGATTGAGTGTTTACAATTTCAAAGTATGAAAAA
CGTTATTGATGATGTGATTCTCGGAATTAGAACTGGGGATGAGTCTTATTTTAAATCGGATTTAAAGGCTACTTTATCTA
CAATGAATATTTTATTCGATATTATGAGGACTCCATGTCAAAACTAG

Upstream 100 bases:

>100_bases
AAAAAGACTGATATCGATATGAGTAAATATGGTAACCAAGAAGATTATCGCCACAATAGAGGCCAGGCTAGCAAGCACTA
GATTACCCGGAAAAGTTTTA

Downstream 100 bases:

>100_bases
TTTATAGAGGTGGATCACCTGCGTTTTCTGGAAAGCTTATCGATTATAATCCAATTGGTAAAGAAGAGAAAGATGCTGCT
ATGGCTGTACTCGAGTCTGG

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MPLGGKPVLQFLVERLKRSKFIDEIIIATSSNIENDAIESLTKEIGIYCFRGSEGDVLSRVIGAADSRKADIIVQLTGDC
PLMDPELIDECVSKYLDGGYDYVANELVRTYPIGMDVAVFSLSLLKETYLEKDLTEMDKEHVTTYIVERPIRYKLLNVRA
DKEQDRPDLQLTLDTKEDYSTLSFIVDSLYTKKSDFNLRDIIQFLDQHKEISAINSEIKRKKKDIRKLSVGLIGLGKIAS
DYDSGIDGIEINSHTKAFLKNEFAEIVVVADQDISKIQNFKMKWDLEPISFIGLDAFWASEINLDLLSICSSTASHFEIL
KKAMERNIPYILCEKPITDKEDELNEIAELSKKSNSKIIVNHILRWEPGVDSIKEKLSQEKIQKVIVFYAKGFLHNGIHV
VDLSLYLFGNPKKIIKRKEHIDGFGYLNFDFDLVYDSFEISFFALDEEKFSIFEYSIYTDLGKFVIDELTSKIKYFSIIK
HPNIEGYQYIGSKAEEIECLQFQSMKNVIDDVILGIRTGDESYFKSDLKATLSTMNILFDIMRTPCQN

Sequences:

>Translated_548_residues
MPLGGKPVLQFLVERLKRSKFIDEIIIATSSNIENDAIESLTKEIGIYCFRGSEGDVLSRVIGAADSRKADIIVQLTGDC
PLMDPELIDECVSKYLDGGYDYVANELVRTYPIGMDVAVFSLSLLKETYLEKDLTEMDKEHVTTYIVERPIRYKLLNVRA
DKEQDRPDLQLTLDTKEDYSTLSFIVDSLYTKKSDFNLRDIIQFLDQHKEISAINSEIKRKKKDIRKLSVGLIGLGKIAS
DYDSGIDGIEINSHTKAFLKNEFAEIVVVADQDISKIQNFKMKWDLEPISFIGLDAFWASEINLDLLSICSSTASHFEIL
KKAMERNIPYILCEKPITDKEDELNEIAELSKKSNSKIIVNHILRWEPGVDSIKEKLSQEKIQKVIVFYAKGFLHNGIHV
VDLSLYLFGNPKKIIKRKEHIDGFGYLNFDFDLVYDSFEISFFALDEEKFSIFEYSIYTDLGKFVIDELTSKIKYFSIIK
HPNIEGYQYIGSKAEEIECLQFQSMKNVIDDVILGIRTGDESYFKSDLKATLSTMNILFDIMRTPCQN
>Mature_547_residues
PLGGKPVLQFLVERLKRSKFIDEIIIATSSNIENDAIESLTKEIGIYCFRGSEGDVLSRVIGAADSRKADIIVQLTGDCP
LMDPELIDECVSKYLDGGYDYVANELVRTYPIGMDVAVFSLSLLKETYLEKDLTEMDKEHVTTYIVERPIRYKLLNVRAD
KEQDRPDLQLTLDTKEDYSTLSFIVDSLYTKKSDFNLRDIIQFLDQHKEISAINSEIKRKKKDIRKLSVGLIGLGKIASD
YDSGIDGIEINSHTKAFLKNEFAEIVVVADQDISKIQNFKMKWDLEPISFIGLDAFWASEINLDLLSICSSTASHFEILK
KAMERNIPYILCEKPITDKEDELNEIAELSKKSNSKIIVNHILRWEPGVDSIKEKLSQEKIQKVIVFYAKGFLHNGIHVV
DLSLYLFGNPKKIIKRKEHIDGFGYLNFDFDLVYDSFEISFFALDEEKFSIFEYSIYTDLGKFVIDELTSKIKYFSIIKH
PNIEGYQYIGSKAEEIECLQFQSMKNVIDDVILGIRTGDESYFKSDLKATLSTMNILFDIMRTPCQN

Specific function: Unknown

COG id: COG1861

COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 62748; Mature: 62617

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGGKPVLQFLVERLKRSKFIDEIIIATSSNIENDAIESLTKEIGIYCFRGSEGDVLSR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHH
VIGAADSRKADIIVQLTGDCPLMDPELIDECVSKYLDGGYDYVANELVRTYPIGMDVAVF
HHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
SLSLLKETYLEKDLTEMDKEHVTTYIVERPIRYKLLNVRADKEQDRPDLQLTLDTKEDYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCHHH
TLSFIVDSLYTKKSDFNLRDIIQFLDQHKEISAINSEIKRKKKDIRKLSVGLIGLGKIAS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHH
DYDSGIDGIEINSHTKAFLKNEFAEIVVVADQDISKIQNFKMKWDLEPISFIGLDAFWAS
HHCCCCCCEEECCHHHHHHHHCCEEEEEECCCHHHHHHCCCEEECCCCHHHEECHHHHHC
EINLDLLSICSSTASHFEILKKAMERNIPYILCEKPITDKEDELNEIAELSKKSNSKIIV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
NHILRWEPGVDSIKEKLSQEKIQKVIVFYAKGFLHNGIHVVDLSLYLFGNPKKIIKRKEH
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHHHHHC
IDGFGYLNFDFDLVYDSFEISFFALDEEKFSIFEYSIYTDLGKFVIDELTSKIKYFSIIK
CCCCEEEEEEHEEEEECEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
HPNIEGYQYIGSKAEEIECLQFQSMKNVIDDVILGIRTGDESYFKSDLKATLSTMNILFD
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH
IMRTPCQN
HHHCCCCC
>Mature Secondary Structure 
PLGGKPVLQFLVERLKRSKFIDEIIIATSSNIENDAIESLTKEIGIYCFRGSEGDVLSR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHH
VIGAADSRKADIIVQLTGDCPLMDPELIDECVSKYLDGGYDYVANELVRTYPIGMDVAVF
HHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
SLSLLKETYLEKDLTEMDKEHVTTYIVERPIRYKLLNVRADKEQDRPDLQLTLDTKEDYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCHHH
TLSFIVDSLYTKKSDFNLRDIIQFLDQHKEISAINSEIKRKKKDIRKLSVGLIGLGKIAS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHH
DYDSGIDGIEINSHTKAFLKNEFAEIVVVADQDISKIQNFKMKWDLEPISFIGLDAFWAS
HHCCCCCCEEECCHHHHHHHHCCEEEEEECCCHHHHHHCCCEEECCCCHHHEECHHHHHC
EINLDLLSICSSTASHFEILKKAMERNIPYILCEKPITDKEDELNEIAELSKKSNSKIIV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
NHILRWEPGVDSIKEKLSQEKIQKVIVFYAKGFLHNGIHVVDLSLYLFGNPKKIIKRKEH
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCHHHHHHHHHC
IDGFGYLNFDFDLVYDSFEISFFALDEEKFSIFEYSIYTDLGKFVIDELTSKIKYFSIIK
CCCCEEEEEEHEEEEECEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
HPNIEGYQYIGSKAEEIECLQFQSMKNVIDDVILGIRTGDESYFKSDLKATLSTMNILFD
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH
IMRTPCQN
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]