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The map label for this gene is ycdQ [C]

Identifier: 116327883

GI number: 116327883

Start: 1379556

End: 1380218

Strand: Direct

Name: ycdQ [C]

Synonym: LBL_1167

Alternate gene names: 116327883

Gene position: 1379556-1380218 (Clockwise)

Preceding gene: 116327882

Following gene: 116327884

Centisome position: 38.17

GC content: 33.94

Gene sequence:

>663_bases
ATGAAAAAAGCTCCAACAGTTTCCGTTATCGTCGCTGCATTTAATCAAGAGAAGTATATTGGAAGATGTATTCGCTCTCT
ATTGAATCAAAATTTTCCAAAAGAAGATTATGAAATTATTATAATCAATGATGGAAGTACGGATAAGACGAAATATGCCC
TTGAAATCTTCGGCAAAGAAATAAAAGTAATTGAAAACGAGAGTAATAAGGGTTTGTCAGCATCTTTAAATCTTGGAATC
AGATCTGCGTTAGGACAGTTTATCGTTAGGGTCGATGCCGATGATTATGTGAATTCAGATTATGTTAGTATTCTTCATAA
ATTTCTATCTTATAATCCAAATTTCGATGCAGTTGCTTGTGATTATTATTTGGTTGACGACCACGAGGATTTTTTGTCCC
GAAAAAATTGTATGATAGATCCAATTGGCTGTGGAATTATGTTTCGAATTGAACAGCTGATTGATATTGGATTGTATGAC
GACGGATTTCTTTCTCATGAAGATAAAGACTTGAGAATTCGTTTTGAAAAGAAATATTCAATACACAGAGTAGAACTCCC
TCTTTATCGGTATAGAAGGCATGATTCAAATATGACGAATGACTCTGAATTGATGGACGAGCGAATGAAAAGTTTGAGGG
AAAAACATAAAGATCAGCCTTGA

Upstream 100 bases:

>100_bases
GTAATTCATGAAAAACCATTAACAAATGCGTTGGGAAGCGATTTTAAAAACATTCTCACTCAAGAAAAAACTAGATCGAT
CTTTTCCTCGTTTTGAAATG

Downstream 100 bases:

>100_bases
TCTTTTATAGCTTAAGGGTGCATTGTATGCCACAACCGATTCAATTGGGAAATAAAATTATTGCTGGTTTTTTCGATCCT
TATGTGATCGCTGAGATAGG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKKAPTVSVIVAAFNQEKYIGRCIRSLLNQNFPKEDYEIIIINDGSTDKTKYALEIFGKEIKVIENESNKGLSASLNLGI
RSALGQFIVRVDADDYVNSDYVSILHKFLSYNPNFDAVACDYYLVDDHEDFLSRKNCMIDPIGCGIMFRIEQLIDIGLYD
DGFLSHEDKDLRIRFEKKYSIHRVELPLYRYRRHDSNMTNDSELMDERMKSLREKHKDQP

Sequences:

>Translated_220_residues
MKKAPTVSVIVAAFNQEKYIGRCIRSLLNQNFPKEDYEIIIINDGSTDKTKYALEIFGKEIKVIENESNKGLSASLNLGI
RSALGQFIVRVDADDYVNSDYVSILHKFLSYNPNFDAVACDYYLVDDHEDFLSRKNCMIDPIGCGIMFRIEQLIDIGLYD
DGFLSHEDKDLRIRFEKKYSIHRVELPLYRYRRHDSNMTNDSELMDERMKSLREKHKDQP
>Mature_220_residues
MKKAPTVSVIVAAFNQEKYIGRCIRSLLNQNFPKEDYEIIIINDGSTDKTKYALEIFGKEIKVIENESNKGLSASLNLGI
RSALGQFIVRVDADDYVNSDYVSILHKFLSYNPNFDAVACDYYLVDDHEDFLSRKNCMIDPIGCGIMFRIEQLIDIGLYD
DGFLSHEDKDLRIRFEKKYSIHRVELPLYRYRRHDSNMTNDSELMDERMKSLREKHKDQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=122, Percent_Identity=32.7868852459016, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 25636; Mature: 25636

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAPTVSVIVAAFNQEKYIGRCIRSLLNQNFPKEDYEIIIINDGSTDKTKYALEIFGKE
CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCE
IKVIENESNKGLSASLNLGIRSALGQFIVRVDADDYVNSDYVSILHKFLSYNPNFDAVAC
EEEEECCCCCCCEEEECCCHHHHHHHHEEEECCCHHCCCHHHHHHHHHHCCCCCCCEEEE
DYYLVDDHEDFLSRKNCMIDPIGCGIMFRIEQLIDIGLYDDGFLSHEDKDLRIRFEKKYS
EEEEECCCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
IHRVELPLYRYRRHDSNMTNDSELMDERMKSLREKHKDQP
EEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKAPTVSVIVAAFNQEKYIGRCIRSLLNQNFPKEDYEIIIINDGSTDKTKYALEIFGKE
CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCE
IKVIENESNKGLSASLNLGIRSALGQFIVRVDADDYVNSDYVSILHKFLSYNPNFDAVAC
EEEEECCCCCCCEEEECCCHHHHHHHHEEEECCCHHCCCHHHHHHHHHHCCCCCCCEEEE
DYYLVDDHEDFLSRKNCMIDPIGCGIMFRIEQLIDIGLYDDGFLSHEDKDLRIRFEKKYS
EEEEECCCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
IHRVELPLYRYRRHDSNMTNDSELMDERMKSLREKHKDQP
EEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]