| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327426
Identifier: 116327426
GI number: 116327426
Start: 708494
End: 709834
Strand: Direct
Name: 116327426
Synonym: LBL_0636
Alternate gene names: NA
Gene position: 708494-709834 (Clockwise)
Preceding gene: 116327425
Following gene: 116327427
Centisome position: 19.6
GC content: 42.21
Gene sequence:
>1341_bases CTGAAGAATTTCTTTTTTAGCGTTTTTATTCCATTCTTTCTCATCTCTTCGATTGCCGCCGCAGAAACTCTAAAAGACGA ATTTAAGGAAAATGTATTGAGTTTTTCCAAGTCTCAGGCTTCCGCGATTTCCGAGATTCGATCTAAAAATCGATTGGACC TCGTGAAGGAACTTCCTTCCGTTTTTCAAAACGAATCGGTCGAAGAAAAGGCGCAAATTGCGATCTTGAAACTTTTTGCA GAATTAGATGAGCTGGATATTCTTGCGCCGAATTGGGTCGGGGTTTTGGATTCTGTTTTTCAAAATACGACTAACGTAAC ATTGAGGAAGGAAATTCTTCTTTTGACCGAAAAGAAAAAGGAAAAACGACTGATCTATTCGGTAATCGCGGCGTTCAATG ATCCTGAAACTTCGATACGAGCGTTGGCTTATCGTTTGATGTATCTGTTAAAGGACGATCGGGCTTTGCCGGTTCTTCTC GATATGTCTTTATCCAAAGATCCTCTGCAGAGAATGTATTTTCTCGAATCTTCTTTGATTATCAAAGATGAAAGAATTCA GAATCAGATTCATAAACTGGCGAACGACGAAAGTTCGGGAGTAAGAAAAAAATATCTTATCGCGATCAATCGCTTGGGGA TTACGGAAAAATTTTCTCAGTTTCAAAAATCCGCAACCGGCGATCCGGACGACGACGTGAAAATCGTCGCATTAGAAATT CTTAAAAATAAAAAAAACCGCCAGAACATTTCCTTATTTTATAAGGGACTTACGGATCCTAATCCGGATATTCGCAGAAT TTCTTTGGAGGCTCTGTTGCTCTTCCAGGACAAACAAGGAGCCAAGGTGATCTCCGATCAATTGGCCAAGGAAGAGAATT TGTTTCTCAAGGCGAGAATGATCGATCTTTTATTGGATCTTGGAAACCACGGAGGAGGTCAGGGAATTCTTGCCGTTTTA ACGGACGGAGAAGAGGCGGAACTTAGAACGAAAGCCGCTTACGCGGTAGGAAAACTCGGGGTGAACATAAACTCGGTCGA ACTCGCGAAAATTCTTTCCGAAGAGAAAGAGGATGCCGTTAAGTGGCAATTGATTCGATCTTTGGGAGAACTTAAGGATA AGAACGCGGTATCCGGGTTGCTTATGTTTGCGAGAAATCCCAGGGAAAAATTGAACCTGAGGATCGAGGCGGTCATCACG ATCCGGATCATCAACGACCCAGATAGTCTTTCTTCGATCTTTGAAGCTTACGTTTCCGAGAGGGAAAGGACGCTTCGTAT GGAATTGGAAAACACGGTGCGCGAAATACTCAACTTAAAATTCCCGCCTAAAGTTCCATAA
Upstream 100 bases:
>100_bases AGAGTTCGATTGACTTGGATCCTTCCTTGTCCGAAGCATACGAGAACAAACGCGCCGCATCCGCCGCTTTGGAGGAATCT ACACGTAGAGAGGGGTTTTT
Downstream 100 bases:
>100_bases GAATTATTGAATCTAATTTTTGGAATAATTTCGGGCTTCACCTGTATTTCGAGGAAGATAAAAATATATTGTCTATTTAT AGGGATTCCCGTTCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKNFFFSVFIPFFLISSIAAAETLKDEFKENVLSFSKSQASAISEIRSKNRLDLVKELPSVFQNESVEEKAQIAILKLFA ELDELDILAPNWVGVLDSVFQNTTNVTLRKEILLLTEKKKEKRLIYSVIAAFNDPETSIRALAYRLMYLLKDDRALPVLL DMSLSKDPLQRMYFLESSLIIKDERIQNQIHKLANDESSGVRKKYLIAINRLGITEKFSQFQKSATGDPDDDVKIVALEI LKNKKNRQNISLFYKGLTDPNPDIRRISLEALLLFQDKQGAKVISDQLAKEENLFLKARMIDLLLDLGNHGGGQGILAVL TDGEEAELRTKAAYAVGKLGVNINSVELAKILSEEKEDAVKWQLIRSLGELKDKNAVSGLLMFARNPREKLNLRIEAVIT IRIINDPDSLSSIFEAYVSERERTLRMELENTVREILNLKFPPKVP
Sequences:
>Translated_446_residues MKNFFFSVFIPFFLISSIAAAETLKDEFKENVLSFSKSQASAISEIRSKNRLDLVKELPSVFQNESVEEKAQIAILKLFA ELDELDILAPNWVGVLDSVFQNTTNVTLRKEILLLTEKKKEKRLIYSVIAAFNDPETSIRALAYRLMYLLKDDRALPVLL DMSLSKDPLQRMYFLESSLIIKDERIQNQIHKLANDESSGVRKKYLIAINRLGITEKFSQFQKSATGDPDDDVKIVALEI LKNKKNRQNISLFYKGLTDPNPDIRRISLEALLLFQDKQGAKVISDQLAKEENLFLKARMIDLLLDLGNHGGGQGILAVL TDGEEAELRTKAAYAVGKLGVNINSVELAKILSEEKEDAVKWQLIRSLGELKDKNAVSGLLMFARNPREKLNLRIEAVIT IRIINDPDSLSSIFEAYVSERERTLRMELENTVREILNLKFPPKVP >Mature_446_residues MKNFFFSVFIPFFLISSIAAAETLKDEFKENVLSFSKSQASAISEIRSKNRLDLVKELPSVFQNESVEEKAQIAILKLFA ELDELDILAPNWVGVLDSVFQNTTNVTLRKEILLLTEKKKEKRLIYSVIAAFNDPETSIRALAYRLMYLLKDDRALPVLL DMSLSKDPLQRMYFLESSLIIKDERIQNQIHKLANDESSGVRKKYLIAINRLGITEKFSQFQKSATGDPDDDVKIVALEI LKNKKNRQNISLFYKGLTDPNPDIRRISLEALLLFQDKQGAKVISDQLAKEENLFLKARMIDLLLDLGNHGGGQGILAVL TDGEEAELRTKAAYAVGKLGVNINSVELAKILSEEKEDAVKWQLIRSLGELKDKNAVSGLLMFARNPREKLNLRIEAVIT IRIINDPDSLSSIFEAYVSERERTLRMELENTVREILNLKFPPKVP
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50614; Mature: 50614
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFFFSVFIPFFLISSIAAAETLKDEFKENVLSFSKSQASAISEIRSKNRLDLVKELPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VFQNESVEEKAQIAILKLFAELDELDILAPNWVGVLDSVFQNTTNVTLRKEILLLTEKKK HHCCCCHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHCCCCCEEEHHHHHEECCCHH EKRLIYSVIAAFNDPETSIRALAYRLMYLLKDDRALPVLLDMSLSKDPLQRMYFLESSLI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHE IKDERIQNQIHKLANDESSGVRKKYLIAINRLGITEKFSQFQKSATGDPDDDVKIVALEI EEHHHHHHHHHHHHCCCCCCCHHHHEEEEHHCCCHHHHHHHHHHCCCCCCCCCEEEHHHH LKNKKNRQNISLFYKGLTDPNPDIRRISLEALLLFQDKQGAKVISDQLAKEENLFLKARM HHCCCCCCCEEEEEECCCCCCCCHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH IDLLLDLGNHGGGQGILAVLTDGEEAELRTKAAYAVGKLGVNINSVELAKILSEEKEDAV HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KWQLIRSLGELKDKNAVSGLLMFARNPREKLNLRIEAVITIRIINDPDSLSSIFEAYVSE HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCEEEEEEEEEEEECCCHHHHHHHHHHHHH RERTLRMELENTVREILNLKFPPKVP HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKNFFFSVFIPFFLISSIAAAETLKDEFKENVLSFSKSQASAISEIRSKNRLDLVKELPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VFQNESVEEKAQIAILKLFAELDELDILAPNWVGVLDSVFQNTTNVTLRKEILLLTEKKK HHCCCCHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHCCCCCEEEHHHHHEECCCHH EKRLIYSVIAAFNDPETSIRALAYRLMYLLKDDRALPVLLDMSLSKDPLQRMYFLESSLI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHE IKDERIQNQIHKLANDESSGVRKKYLIAINRLGITEKFSQFQKSATGDPDDDVKIVALEI EEHHHHHHHHHHHHCCCCCCCHHHHEEEEHHCCCHHHHHHHHHHCCCCCCCCCEEEHHHH LKNKKNRQNISLFYKGLTDPNPDIRRISLEALLLFQDKQGAKVISDQLAKEENLFLKARM HHCCCCCCCEEEEEECCCCCCCCHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH IDLLLDLGNHGGGQGILAVLTDGEEAELRTKAAYAVGKLGVNINSVELAKILSEEKEDAV HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KWQLIRSLGELKDKNAVSGLLMFARNPREKLNLRIEAVITIRIINDPDSLSSIFEAYVSE HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCEEEEEEEEEEEECCCHHHHHHHHHHHHH RERTLRMELENTVREILNLKFPPKVP HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA