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The map label for this gene is ydjI [H]

Identifier: 116327366

GI number: 116327366

Start: 622627

End: 623622

Strand: Direct

Name: ydjI [H]

Synonym: LBL_0562

Alternate gene names: 116327366

Gene position: 622627-623622 (Clockwise)

Preceding gene: 116327365

Following gene: 116327367

Centisome position: 17.23

GC content: 43.47

Gene sequence:

>996_bases
ATGGCATTGATTGATGTAATCAAATACGAAGGACAGCCCGGAGAAATCGTCTGGAAATTTCCAAGAAATGATATCAGTCA
TTTCGGTCAATTGGTAGTAAACGAAAGTCAGGAAGCGGTTTTTTTTAAGGAAGGAAAGGCCTTGGATGTATTTGGTCCCG
GGACGCATACTTTGAAAACCGGAAACATTCCGATTTTGGAAAAACTCGTAAACTTACCGTTTGGTGGACAAACTCCGTTT
ACGGCCGAAATCGTCTATGTAAACAAGTCCGTGATCAATATGACTTGGGGAACTCCGGCTCCGATTCAAATCGAAGATCC
GAAGTATCATATCACTTTGGGACTTAGAGCATTCGGAAATTATAATATAAAAGTGATCGACTCCAAGTCTTTCGTAAACA
CGGTAGTCGGAACCCAGCACAGATTCGATCATGACGGGGTTGATAAACTTCTCAAGCCGATGGTCGTAACAAGGCTCAGC
GATTTTATATCTGAAGTCGTATTAAAAAACGGGGTTCCTATTACTCAAATCTCCCAGCATTTAGAAGAAACTTCCGCCGC
AGGTAAAACCAAAACTCAACCTGATTTTCAAAAATACGGGTTAGAGGTCGTGGATTTTTTCATTCAGTCGATCAATTTCG
ATCAGAACGATCCTAACTTTCAAAAAATCCAAAAAGTTCTCACTGATAAGTTCGAAATCGATACGATGGGGAATATGTAT
CAGCAAAAAAGAATGTTGGATATCGGCGAGGCTGCAGCGAGTAATCCGGGCGGTTCCGCCGGAGAAGGGATGAGCGCGGG
GATGGGGCTCGGAATGGGAATGAACATGGCGGGAATGATGGCCAATATGATGGGCCAAAATCAAGGCGGTGGTGCAAAGC
CTGCGGGAGATGATGCGGCGGCAAGGATTGCGAAGTTGAAATCACTTCTCGACGGGGGACTGATCACACAAGAAGAATTT
GATACCAAAAAAAAGGACATTTTGAATTCTATCTAA

Upstream 100 bases:

>100_bases
CGAAACTCTGAGATTTACGGATGGGTCGTATCTTGTTGAAAGAGTTGAGAGGATCGTGTTCTAACACACGGTATTCTTAA
TAACGATAAAGGAATAAATC

Downstream 100 bases:

>100_bases
AATATGATCTCCACTCTTACCCGGTACAAAGCGGAATTTGAATGTATTAACGACTCTTGCAAAACTCGGTACGATCTGAA
CGAGATCGTCTACGAATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MALIDVIKYEGQPGEIVWKFPRNDISHFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKTGNIPILEKLVNLPFGGQTPF
TAEIVYVNKSVINMTWGTPAPIQIEDPKYHITLGLRAFGNYNIKVIDSKSFVNTVVGTQHRFDHDGVDKLLKPMVVTRLS
DFISEVVLKNGVPITQISQHLEETSAAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIDTMGNMY
QQKRMLDIGEAAASNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGGAKPAGDDAAARIAKLKSLLDGGLITQEEF
DTKKKDILNSI

Sequences:

>Translated_331_residues
MALIDVIKYEGQPGEIVWKFPRNDISHFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKTGNIPILEKLVNLPFGGQTPF
TAEIVYVNKSVINMTWGTPAPIQIEDPKYHITLGLRAFGNYNIKVIDSKSFVNTVVGTQHRFDHDGVDKLLKPMVVTRLS
DFISEVVLKNGVPITQISQHLEETSAAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIDTMGNMY
QQKRMLDIGEAAASNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGGAKPAGDDAAARIAKLKSLLDGGLITQEEF
DTKKKDILNSI
>Mature_330_residues
ALIDVIKYEGQPGEIVWKFPRNDISHFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKTGNIPILEKLVNLPFGGQTPFT
AEIVYVNKSVINMTWGTPAPIQIEDPKYHITLGLRAFGNYNIKVIDSKSFVNTVVGTQHRFDHDGVDKLLKPMVVTRLSD
FISEVVLKNGVPITQISQHLEETSAAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIDTMGNMYQ
QKRMLDIGEAAASNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGGAKPAGDDAAARIAKLKSLLDGGLITQEEFD
TKKKDILNSI

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36179; Mature: 36048

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIDVIKYEGQPGEIVWKFPRNDISHFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKT
CCCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCEEEC
GNIPILEKLVNLPFGGQTPFTAEIVYVNKSVINMTWGTPAPIQIEDPKYHITLGLRAFGN
CCCHHHHHHHCCCCCCCCCCEEEEEEEECEEEEEECCCCCCEEECCCCEEEEEEEEECCC
YNIKVIDSKSFVNTVVGTQHRFDHDGVDKLLKPMVVTRLSDFISEVVLKNGVPITQISQH
CCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LEETSAAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIDTMGNMY
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
QQKRMLDIGEAAASNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGGAKPAGDDAA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
ARIAKLKSLLDGGLITQEEFDTKKKDILNSI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALIDVIKYEGQPGEIVWKFPRNDISHFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKT
CCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCEEEC
GNIPILEKLVNLPFGGQTPFTAEIVYVNKSVINMTWGTPAPIQIEDPKYHITLGLRAFGN
CCCHHHHHHHCCCCCCCCCCEEEEEEEECEEEEEECCCCCCEEECCCCEEEEEEEEECCC
YNIKVIDSKSFVNTVVGTQHRFDHDGVDKLLKPMVVTRLSDFISEVVLKNGVPITQISQH
CCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LEETSAAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIDTMGNMY
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
QQKRMLDIGEAAASNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGGAKPAGDDAA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
ARIAKLKSLLDGGLITQEEFDTKKKDILNSI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]