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The map label for this gene is yeaW [H]

Identifier: 116249202

GI number: 116249202

Start: 583643

End: 584896

Strand: Reverse

Name: yeaW [H]

Synonym: pRL120538

Alternate gene names: 116249202

Gene position: 584896-583643 (Counterclockwise)

Preceding gene: 116249204

Following gene: 116249201

Centisome position: 67.23

GC content: 59.89

Gene sequence:

>1254_bases
ATGCTAAACAAGCTCCCATCTTCCATTTCCGCCCTTCTCGACGCTCGTGCCAACGGTCACTCTTTGCCGGCGGGCCTTTA
CGTCAGGGAAGACGTGTTCGAAGCAGACATCGACGTCTTCTTCCACAATCACTGGATCTGCGTCGGTCTCGATTGCGATG
TTCCCGAACCCGGTGATGCCACGGTGATCGATATCGGCAAGACGAGCCTGATCCTTCTGCGTGACGACGACGGAGAAATT
CGCGTCCTGCACAATGTCTGCCGCCATCGCGGCTCCCGCCTTCTCGATCCGGGCAAGACGATCGTCTCAAAACTCGTCTG
TCCCTATCACACCTGGACATATGAACTGACGGGTGAACTCAGGTACGCGCCTCACATGGGCAAGGACTTCGACAAGGAGT
GTCGGAGCCTCAAGCCCGTCACTTTCAAATCGATCGGCGGACTGATTTATGTCTGTCTCTCCGACAATCCGCCCGAGGAC
ATCGCTATCCTCGAACAGGCCATGACCGAGCGCCTCGCCCCCTACGACATCCGGAACGCAAAGGTTGCCTTCCAAACGGA
TGTCATCGAGGATGGCAACTGGAAGCTCACGATGGAAAACAATCGCGAATGCTACCATTGCTCCGCCAACCATCCGGAGC
TCTGCGTCTCCTTCGTCGATCTCGACTTCGGCTTCGACCCCGAGACGCTGAGCCCGGAGGATCGCGAACAGGCCGAGGAG
CATTTCAGGCTGTATGAAGAGCGGACGAACGCGTGGGAGTCTGACGGCTTCCCCTCGGCGGCCGTCGAGCAGCTCGCCGA
CTGCGCCACCAATTTCCGCACCCAGCGGCTGATCATCGCAGGCGCCGGCGAATCCCAGACTCACGACGCCACCGCCGCAT
CCTCCAAGCTTCTTGGGCACATGACCCGCAAGGATCTCGGCGACACGCATCTTTGGGGCCACAACAGCTGGAACCACTTC
ATGGGCGACCATGCCGTGGTGGCAACCGTCATCCCGCTCTCGGCGGGCAAGACGCTGGTCAGAACCAAGTGGCTGGTCCA
CAAGGACGCCGTCGAAGGCGTGGATTACGATCTCGACAAACTGACGGATGTCTGGGTCGCGACTACCGACCAGGACGCCG
ATCTCGTGGCGCGCTCCCATGCAGGCACTCTCGACCCGGCCTATCAGCCCGGCCCCTACTCCCGCTTTTCCGAGACGAAC
CTCGACAAGTTTGCCAGCTGGTACATCGATCGGATGCGCGCCCATGGATACTAG

Upstream 100 bases:

>100_bases
CCATCGCATGACAATAACTTATGCGAACCTGATTTTTTATGCCGTTGAAACAACGGCACTGCAAGGGCAATCTCGGGAAA
CTCTCGCATAAGAGGTTCTG

Downstream 100 bases:

>100_bases
GAGCCCGCAGATGCCTGCAGCCAGGGCCGCCCTCGACGACGTCTGGAACCCTGAAGACGACGACGCGCTCGTCTGCCTCG
ACGTCCAGCAGGAGACCCAC

Product: putative Rieske 2Fe2S dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLNKLPSSISALLDARANGHSLPAGLYVREDVFEADIDVFFHNHWICVGLDCDVPEPGDATVIDIGKTSLILLRDDDGEI
RVLHNVCRHRGSRLLDPGKTIVSKLVCPYHTWTYELTGELRYAPHMGKDFDKECRSLKPVTFKSIGGLIYVCLSDNPPED
IAILEQAMTERLAPYDIRNAKVAFQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPEDREQAEE
HFRLYEERTNAWESDGFPSAAVEQLADCATNFRTQRLIIAGAGESQTHDATAASSKLLGHMTRKDLGDTHLWGHNSWNHF
MGDHAVVATVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDKLTDVWVATTDQDADLVARSHAGTLDPAYQPGPYSRFSETN
LDKFASWYIDRMRAHGY

Sequences:

>Translated_417_residues
MLNKLPSSISALLDARANGHSLPAGLYVREDVFEADIDVFFHNHWICVGLDCDVPEPGDATVIDIGKTSLILLRDDDGEI
RVLHNVCRHRGSRLLDPGKTIVSKLVCPYHTWTYELTGELRYAPHMGKDFDKECRSLKPVTFKSIGGLIYVCLSDNPPED
IAILEQAMTERLAPYDIRNAKVAFQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPEDREQAEE
HFRLYEERTNAWESDGFPSAAVEQLADCATNFRTQRLIIAGAGESQTHDATAASSKLLGHMTRKDLGDTHLWGHNSWNHF
MGDHAVVATVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDKLTDVWVATTDQDADLVARSHAGTLDPAYQPGPYSRFSETN
LDKFASWYIDRMRAHGY
>Mature_417_residues
MLNKLPSSISALLDARANGHSLPAGLYVREDVFEADIDVFFHNHWICVGLDCDVPEPGDATVIDIGKTSLILLRDDDGEI
RVLHNVCRHRGSRLLDPGKTIVSKLVCPYHTWTYELTGELRYAPHMGKDFDKECRSLKPVTFKSIGGLIYVCLSDNPPED
IAILEQAMTERLAPYDIRNAKVAFQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPEDREQAEE
HFRLYEERTNAWESDGFPSAAVEQLADCATNFRTQRLIIAGAGESQTHDATAASSKLLGHMTRKDLGDTHLWGHNSWNHF
MGDHAVVATVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDKLTDVWVATTDQDADLVARSHAGTLDPAYQPGPYSRFSETN
LDKFASWYIDRMRAHGY

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=196, Percent_Identity=29.5918367346939, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788888, Length=119, Percent_Identity=31.9327731092437, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 46822; Mature: 46822

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKLPSSISALLDARANGHSLPAGLYVREDVFEADIDVFFHNHWICVGLDCDVPEPGDA
CCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCEEEEEECCEEEEEEECCCCCCCCE
TVIDIGKTSLILLRDDDGEIRVLHNVCRHRGSRLLDPGKTIVSKLVCPYHTWTYELTGEL
EEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCE
RYAPHMGKDFDKECRSLKPVTFKSIGGLIYVCLSDNPPEDIAILEQAMTERLAPYDIRNA
EECCCCCCCHHHHHHCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC
KVAFQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPEDREQAEE
EEEEEEEEEECCCEEEEEECCCCEEEECCCCHHHEEEEEEECCCCCCCCCCCCHHHHHHH
HFRLYEERTNAWESDGFPSAAVEQLADCATNFRTQRLIIAGAGESQTHDATAASSKLLGH
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
MTRKDLGDTHLWGHNSWNHFMGDHAVVATVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDK
HHHHCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH
LTDVWVATTDQDADLVARSHAGTLDPAYQPGPYSRFSETNLDKFASWYIDRMRAHGY
HCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNKLPSSISALLDARANGHSLPAGLYVREDVFEADIDVFFHNHWICVGLDCDVPEPGDA
CCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCEEEEEECCEEEEEEECCCCCCCCE
TVIDIGKTSLILLRDDDGEIRVLHNVCRHRGSRLLDPGKTIVSKLVCPYHTWTYELTGEL
EEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCE
RYAPHMGKDFDKECRSLKPVTFKSIGGLIYVCLSDNPPEDIAILEQAMTERLAPYDIRNA
EECCCCCCCHHHHHHCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC
KVAFQTDVIEDGNWKLTMENNRECYHCSANHPELCVSFVDLDFGFDPETLSPEDREQAEE
EEEEEEEEEECCCEEEEEECCCCEEEECCCCHHHEEEEEEECCCCCCCCCCCCHHHHHHH
HFRLYEERTNAWESDGFPSAAVEQLADCATNFRTQRLIIAGAGESQTHDATAASSKLLGH
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
MTRKDLGDTHLWGHNSWNHFMGDHAVVATVIPLSAGKTLVRTKWLVHKDAVEGVDYDLDK
HHHHCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH
LTDVWVATTDQDADLVARSHAGTLDPAYQPGPYSRFSETNLDKFASWYIDRMRAHGY
HCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]