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The map label for this gene is 116249033

Identifier: 116249033

GI number: 116249033

Start: 393801

End: 394061

Strand: Reverse

Name: 116249033

Synonym: pRL120364

Alternate gene names: NA

Gene position: 394061-393801 (Counterclockwise)

Preceding gene: 116249034

Following gene: 116249032

Centisome position: 45.29

GC content: 62.45

Gene sequence:

>261_bases
ATGCCGCAATACGCTCGCGTTTTCCAATCCGGCAATTCGCAAGCCGTCCGGCTGCCGAAAGAGTTCCGCTTCGACGTCGA
CCAGGTGGAGGTGACGCGGGAAGGCGATGCTGTGATCCTTCGGCCACGGGCCGATCGCGGTATGCGGTGGGCATCGTTGC
ATAGCGCCTTGGAGCGCGGCCTCAGCGACGATTTCATGGCGGAAGGGCGAGAGCAGCCGGAGGCGCAGGAGAGGCCTGAT
CTTCAGAACCTGTTCAAGTGA

Upstream 100 bases:

>100_bases
CGGCATCATGCTCCAGTAGAAGGCGCAGGGACGGCTTCTTGCATGAATACCGCCAATCGCGTATATACAACAACATATAT
ACGAGCCTCGGAGAGCACCC

Downstream 100 bases:

>100_bases
TCACGCATCTTATCGACACCAATGCGGTGATCGCCCTGATCGGCAGGAAATCCGAAACACTGCTGAAGCGCGTGATCGAT
AGCGACGAGGGATCGATCGG

Product: putative virulence-associated protein homologue

Products: NA

Alternate protein names: Virulence-Associated Protein; Virulence-Associated Protein Homologue

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MPQYARVFQSGNSQAVRLPKEFRFDVDQVEVTREGDAVILRPRADRGMRWASLHSALERGLSDDFMAEGREQPEAQERPD
LQNLFK

Sequences:

>Translated_86_residues
MPQYARVFQSGNSQAVRLPKEFRFDVDQVEVTREGDAVILRPRADRGMRWASLHSALERGLSDDFMAEGREQPEAQERPD
LQNLFK
>Mature_85_residues
PQYARVFQSGNSQAVRLPKEFRFDVDQVEVTREGDAVILRPRADRGMRWASLHSALERGLSDDFMAEGREQPEAQERPDL
QNLFK

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9948; Mature: 9817

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQYARVFQSGNSQAVRLPKEFRFDVDQVEVTREGDAVILRPRADRGMRWASLHSALERG
CCHHHHHHHCCCCCEEECCHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHCC
LSDDFMAEGREQPEAQERPDLQNLFK
CCCCHHHCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
PQYARVFQSGNSQAVRLPKEFRFDVDQVEVTREGDAVILRPRADRGMRWASLHSALERG
CHHHHHHHCCCCCEEECCHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHCC
LSDDFMAEGREQPEAQERPDLQNLFK
CCCCHHHCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA