Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
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Accession | NC_008378 |
Length | 870,021 |
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The map label for this gene is 116249015
Identifier: 116249015
GI number: 116249015
Start: 371983
End: 372750
Strand: Reverse
Name: 116249015
Synonym: pRL120346
Alternate gene names: NA
Gene position: 372750-371983 (Counterclockwise)
Preceding gene: 116249017
Following gene: 116249013
Centisome position: 42.84
GC content: 53.52
Gene sequence:
>768_bases ATGTTTCATGGGAACAGGGACCCAGGGCAGTCCGTTCGGCCGCCTTTGCTCTTTGTTCACGGCGCGTTTACCGGGAGCTG GATGTGGAGCAAATACATTCCTCATTTCATATCCGCTGGATGGAACTCTTATTGCGTCAACCTGCGAGGCCACTACAAAA GCAGGTCGGTGGATTTCACAAAAATCCTGTTTGAAGATTACCTGGAAGACATCCGGCTGGTGATCTCCGAAATCGTCGAA GAATGTGGAACTCCTCCCATCGTGATCGCTTTCAGCATGGGAGGAATCCTGAGCCAGAAACTGGCGGAAAGCGTGAAGAT AGCCGGGCTGGTGCTGATCGATTCCAGTATTTGCAGGGAAGTGCATGCGGAGGCGCACTATCGCGATCTCGCGTTGCGAA TGCCCGACCTCGTCGTGCCTGCTCCCGTGCGTGACGAGCAAATCAGTACCGATGAAACATTCGAGGATATCGAATTCCAG CGGAAGTACCTGTCCATGGAATCTGCAAAAGCATTCAGCGAATTTTCCTTTCATTTCGGGGCGGAGGGGATTTCCATCGA AAGCGAGAAGATCACGTGCCCCAGCCTCGTCATTTGCGCCGTCAACGACGAATCCGATGATCATCGAGGCCTGGCGACAG CACGCCACATCGGTGGCGAATATCTAGGTCTCTGGGGTACGACACATACGGGTCTGCTCGTCGGGCAGAGGTATTACGAA GCTGTAAGCCGCATTATGGTCTGGTTGGCACGCTTTGATGGATGCTAG
Upstream 100 bases:
>100_bases GCCAGCCAATATCAAAGGAGTGAGCGGTATGAGGGACTATGCAAAAGAACGACCCGAGCACACGGAAAAATACATCGGAG AGAATGACCTATTTCTGGAA
Downstream 100 bases:
>100_bases ATCTTCCGATAGAGCGCCACCTCGATCGGCCCCCGAGCACAGAGCCGCAAGCCAAGCTCAATCCTCCAGGCCAAGGCTCG CCAGCAGGCGGCTGACATAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Protein; Acetone-Cyanohydrin Lyase; Alpha/Beta Hydrolase Fold Protein; Hydrolase Or Acyltransferase; Hydrolase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MFHGNRDPGQSVRPPLLFVHGAFTGSWMWSKYIPHFISAGWNSYCVNLRGHYKSRSVDFTKILFEDYLEDIRLVISEIVE ECGTPPIVIAFSMGGILSQKLAESVKIAGLVLIDSSICREVHAEAHYRDLALRMPDLVVPAPVRDEQISTDETFEDIEFQ RKYLSMESAKAFSEFSFHFGAEGISIESEKITCPSLVICAVNDESDDHRGLATARHIGGEYLGLWGTTHTGLLVGQRYYE AVSRIMVWLARFDGC
Sequences:
>Translated_255_residues MFHGNRDPGQSVRPPLLFVHGAFTGSWMWSKYIPHFISAGWNSYCVNLRGHYKSRSVDFTKILFEDYLEDIRLVISEIVE ECGTPPIVIAFSMGGILSQKLAESVKIAGLVLIDSSICREVHAEAHYRDLALRMPDLVVPAPVRDEQISTDETFEDIEFQ RKYLSMESAKAFSEFSFHFGAEGISIESEKITCPSLVICAVNDESDDHRGLATARHIGGEYLGLWGTTHTGLLVGQRYYE AVSRIMVWLARFDGC >Mature_255_residues MFHGNRDPGQSVRPPLLFVHGAFTGSWMWSKYIPHFISAGWNSYCVNLRGHYKSRSVDFTKILFEDYLEDIRLVISEIVE ECGTPPIVIAFSMGGILSQKLAESVKIAGLVLIDSSICREVHAEAHYRDLALRMPDLVVPAPVRDEQISTDETFEDIEFQ RKYLSMESAKAFSEFSFHFGAEGISIESEKITCPSLVICAVNDESDDHRGLATARHIGGEYLGLWGTTHTGLLVGQRYYE AVSRIMVWLARFDGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28673; Mature: 28673
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHGNRDPGQSVRPPLLFVHGAFTGSWMWSKYIPHFISAGWNSYCVNLRGHYKSRSVDFT CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHH KILFEDYLEDIRLVISEIVEECGTPPIVIAFSMGGILSQKLAESVKIAGLVLIDSSICRE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECHHHHHH VHAEAHYRDLALRMPDLVVPAPVRDEQISTDETFEDIEFQRKYLSMESAKAFSEFSFHFG HHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEGISIESEKITCPSLVICAVNDESDDHRGLATARHIGGEYLGLWGTTHTGLLVGQRYYE CCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH AVSRIMVWLARFDGC HHHHHHHHHHHHCCC >Mature Secondary Structure MFHGNRDPGQSVRPPLLFVHGAFTGSWMWSKYIPHFISAGWNSYCVNLRGHYKSRSVDFT CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHH KILFEDYLEDIRLVISEIVEECGTPPIVIAFSMGGILSQKLAESVKIAGLVLIDSSICRE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECHHHHHH VHAEAHYRDLALRMPDLVVPAPVRDEQISTDETFEDIEFQRKYLSMESAKAFSEFSFHFG HHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEGISIESEKITCPSLVICAVNDESDDHRGLATARHIGGEYLGLWGTTHTGLLVGQRYYE CCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH AVSRIMVWLARFDGC HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA