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The map label for this gene is rbsB [C]

Identifier: 116248953

GI number: 116248953

Start: 301295

End: 302311

Strand: Direct

Name: rbsB [C]

Synonym: pRL120284

Alternate gene names: 116248953

Gene position: 301295-302311 (Clockwise)

Preceding gene: 116248950

Following gene: 116248954

Centisome position: 34.63

GC content: 62.34

Gene sequence:

>1017_bases
ATGACAATCCGTAAGATGCTTCTGGCATCGGCCGCTATTGCTTGCGCCGCGATGCCCGTTTCCGCCTTTGCCGAGACATC
GGCCAAGAAGATCGCCCTTTCCAACAACTATGCCGGCAACTCGTGGCGGCAGGCCATGCTGACGAGCTGGGGCAAGGTGA
CGGGCGAAGCCGTGAAGGCCGGCACCGTTGCCGCAGCCGACCCTTTCACCACCGCCGAGAACCAGGCGACGGAGCAGGCC
GCGCAGATCCAGAACATGATCCTGCAGGGTTATGACGCCATCGTGCTGAACGCCGCCTCGCCGACGGCGCTGAACGGTGC
GGTCAAGGAAGCCTGCGATGCCGGCATCATCGTCGTGTCCTTCGACGGCATCGTCACTGAACCCTGCGCCTGGCGTATCG
CGGTCAACTTCAAGGAAATGGGCCGCAGCGAGGTCGAGTACCTGTCGAAGAAACTTCCGGACGGCGGCAACCTGCTCGAG
ATCCGCGGCCTTGCCGGTGTCTTTGTCGACGACGAAATCTCGGCGGGCATCCACGAGGGTGTCAAGCAGTTCCCGCAGTT
CAAGATTGCCGGCTCCGTTCACGGCGACTGGGCGCAGGACGTGGCGCAGAAGGCTGTTGCCGGCATCCTGCCGAGTCTGC
CCGACATCGCCGGCGTGGTGACACAGGGCGGTGACGGCTATGGCGCCGCACAGGCGATTGCCGCAACCGACCGGAAGATG
CCGATCATTATCATGGGCAACCGCGAGGACGAACTGAAGTGGTGGAAGGAGCAGAAGGACGCGAAGAGCTACGAGACCAT
GTCCGTATCCATCGCGCCAGGCGTCTCCACACTCGCTTTCTGGGTGGCCCAGCAGATCCTCGACGGCAAGGAAGTCAAGA
AGGACCTCGTCGTGCCCTTCCTGCGCATCGACCAGGACAATCTCGAAACCAACCTCGCCAATACCCAGGCCGGCGGCGTC
GCCAACGTGGAATACACGCAGGCAGACGCAATCAAGGTCATCGAGTCGGCAAAGTAA

Upstream 100 bases:

>100_bases
GAGGAGGAAGCTCAGTGCAAGAACAATTTTCACTCGGACCCAATTGGGCCGGCAGGAGTGAAGCGATCCGCCGACCAGCG
CGATCATCAGGGAGGAAGAC

Downstream 100 bases:

>100_bases
TTCTCCTGGCGACTGCCGCGCGGTCGCAGAAGGTCGCGCGGCATTTTTTGCAAGCAGGCATGGCGGGCAGCATGGATGAC
GTTTTGAAGGCGGTGATCGC

Product: putative ABC transporter component

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; ABC Transporter Component

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTIRKMLLASAAIACAAMPVSAFAETSAKKIALSNNYAGNSWRQAMLTSWGKVTGEAVKAGTVAAADPFTTAENQATEQA
AQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGIIVVSFDGIVTEPCAWRIAVNFKEMGRSEVEYLSKKLPDGGNLLE
IRGLAGVFVDDEISAGIHEGVKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIAGVVTQGGDGYGAAQAIAATDRKM
PIIIMGNREDELKWWKEQKDAKSYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDLVVPFLRIDQDNLETNLANTQAGGV
ANVEYTQADAIKVIESAK

Sequences:

>Translated_338_residues
MTIRKMLLASAAIACAAMPVSAFAETSAKKIALSNNYAGNSWRQAMLTSWGKVTGEAVKAGTVAAADPFTTAENQATEQA
AQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGIIVVSFDGIVTEPCAWRIAVNFKEMGRSEVEYLSKKLPDGGNLLE
IRGLAGVFVDDEISAGIHEGVKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIAGVVTQGGDGYGAAQAIAATDRKM
PIIIMGNREDELKWWKEQKDAKSYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDLVVPFLRIDQDNLETNLANTQAGGV
ANVEYTQADAIKVIESAK
>Mature_337_residues
TIRKMLLASAAIACAAMPVSAFAETSAKKIALSNNYAGNSWRQAMLTSWGKVTGEAVKAGTVAAADPFTTAENQATEQAA
QIQNMILQGYDAIVLNAASPTALNGAVKEACDAGIIVVSFDGIVTEPCAWRIAVNFKEMGRSEVEYLSKKLPDGGNLLEI
RGLAGVFVDDEISAGIHEGVKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIAGVVTQGGDGYGAAQAIAATDRKMP
IIIMGNREDELKWWKEQKDAKSYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDLVVPFLRIDQDNLETNLANTQAGGVA
NVEYTQADAIKVIESAK

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35832; Mature: 35701

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRKMLLASAAIACAAMPVSAFAETSAKKIALSNNYAGNSWRQAMLTSWGKVTGEAVKA
CCHHHHHHHHHHHHHHHCCHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHCCHHHHC
GTVAAADPFTTAENQATEQAAQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGIIVVS
CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEE
FDGIVTEPCAWRIAVNFKEMGRSEVEYLSKKLPDGGNLLEIRGLAGVFVDDEISAGIHEG
ECCEECCCCEEEEEECHHHCCHHHHHHHHHHCCCCCCEEEEECCEEEEECCHHHHHHHHH
VKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIAGVVTQGGDGYGAAQAIAATDRKM
HHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCC
PIIIMGNREDELKWWKEQKDAKSYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDLVVPF
CEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHCHH
LRIDQDNLETNLANTQAGGVANVEYTQADAIKVIESAK
EEECCCHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCC
>Mature Secondary Structure 
TIRKMLLASAAIACAAMPVSAFAETSAKKIALSNNYAGNSWRQAMLTSWGKVTGEAVKA
CHHHHHHHHHHHHHHHCCHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHCCHHHHC
GTVAAADPFTTAENQATEQAAQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGIIVVS
CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEE
FDGIVTEPCAWRIAVNFKEMGRSEVEYLSKKLPDGGNLLEIRGLAGVFVDDEISAGIHEG
ECCEECCCCEEEEEECHHHCCHHHHHHHHHHCCCCCCEEEEECCEEEEECCHHHHHHHHH
VKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIAGVVTQGGDGYGAAQAIAATDRKM
HHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCC
PIIIMGNREDELKWWKEQKDAKSYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDLVVPF
CEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHCHH
LRIDQDNLETNLANTQAGGVANVEYTQADAIKVIESAK
EEECCCHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA