Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496878
Identifier: 11496878
GI number: 11496878
Start: 35634
End: 36272
Strand: Reverse
Name: 11496878
Synonym: BBJ48
Alternate gene names: NA
Gene position: 36272-35634 (Counterclockwise)
Preceding gene: 11496879
Following gene: 11496877
Centisome position: 93.41
GC content: 27.54
Gene sequence:
>639_bases GTGCTATATTTATTTACAACAAAAATGAAGATTAAATTTTTAACTATAAGTTTAGCTATCTTGCTAGCTAACTTGATTAT TATTTTATTAAACTTGGTTTTATTTATTGTAAATACATCTACTAGTAGCCCTTATATTGTTCCCTCAGAAAAGATTGATA TTTTACATCAAAGTAATACAGGTGCGGTTAAATTTAAGATTTCCTTAATAAATCATTTGGGCTCTGTTGCTATTGTTTAT GATTACAATTCTGCTAGTGAAAGATTTTATTTAGATTTTGAGATTGTAACAAACAAGAAACCTTTTAATCTTTTAGATGT TTCTCTTAATGATGTTGTTATTAAACCTGAGGTTTTACTTGCATCCAATAGCAAATTAAGATTCGAAGAGGGTCAGTATG TTTTGAATTTTGACGACTCTATAGAAAAAACAGGATTTTTTGTTGACTTAGACCTTAGAAATGAATATTTAAATCTAGCA GAAATTGCAAGAATCTCTGGCATTAATTTTCGTGTTAAATGCATAGAAAGAGAAACAGGTGTTTTACGAAATGTTTTGTT CAAATTAAGTGTCGAAAAGGGTAAAAAATTCTTTGACCTTATTGAAAGATATAACAATAATATTGGCAAGGTTTCTTGA
Upstream 100 bases:
>100_bases AGATACTATGATTACAGCTATTGATAAGTTAATTACTATTTATAAGAAAGTCAAGTCCTAAGGTTTAAAATAAGAGAAAT ATATATATAAAGAATTTTTT
Downstream 100 bases:
>100_bases TTATTTGATTTTGTGGGGAAAAAAAGTTTGATTTAAGGAAATATGAGGAATATTAGCAATTGTATCAAATATATTATATT AACAATGCTTATTGGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNTGAVKFKISLINHLGSVAIVY DYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLA EIARISGINFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS
Sequences:
>Translated_212_residues MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNTGAVKFKISLINHLGSVAIVY DYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLA EIARISGINFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS >Mature_212_residues MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNTGAVKFKISLINHLGSVAIVY DYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLA EIARISGINFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24212; Mature: 24212
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNT CEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCEEEEECCCC GAVKFKISLINHLGSVAIVYDYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLL CEEEEEEEEHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCEEECCEEEE ASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLAEIARISGINFRVKCIERETG ECCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCHHCHHHHHHHCCCCEEEEEEECHHH VLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS HHHHHHHEEEHHHCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNT CEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCEEEEECCCC GAVKFKISLINHLGSVAIVYDYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLL CEEEEEEEEHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCEEECCEEEE ASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLAEIARISGINFRVKCIERETG ECCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCHHCHHHHHHHCCCCEEEEEEECHHH VLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS HHHHHHHEEEHHHCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA