Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496878

Identifier: 11496878

GI number: 11496878

Start: 35634

End: 36272

Strand: Reverse

Name: 11496878

Synonym: BBJ48

Alternate gene names: NA

Gene position: 36272-35634 (Counterclockwise)

Preceding gene: 11496879

Following gene: 11496877

Centisome position: 93.41

GC content: 27.54

Gene sequence:

>639_bases
GTGCTATATTTATTTACAACAAAAATGAAGATTAAATTTTTAACTATAAGTTTAGCTATCTTGCTAGCTAACTTGATTAT
TATTTTATTAAACTTGGTTTTATTTATTGTAAATACATCTACTAGTAGCCCTTATATTGTTCCCTCAGAAAAGATTGATA
TTTTACATCAAAGTAATACAGGTGCGGTTAAATTTAAGATTTCCTTAATAAATCATTTGGGCTCTGTTGCTATTGTTTAT
GATTACAATTCTGCTAGTGAAAGATTTTATTTAGATTTTGAGATTGTAACAAACAAGAAACCTTTTAATCTTTTAGATGT
TTCTCTTAATGATGTTGTTATTAAACCTGAGGTTTTACTTGCATCCAATAGCAAATTAAGATTCGAAGAGGGTCAGTATG
TTTTGAATTTTGACGACTCTATAGAAAAAACAGGATTTTTTGTTGACTTAGACCTTAGAAATGAATATTTAAATCTAGCA
GAAATTGCAAGAATCTCTGGCATTAATTTTCGTGTTAAATGCATAGAAAGAGAAACAGGTGTTTTACGAAATGTTTTGTT
CAAATTAAGTGTCGAAAAGGGTAAAAAATTCTTTGACCTTATTGAAAGATATAACAATAATATTGGCAAGGTTTCTTGA

Upstream 100 bases:

>100_bases
AGATACTATGATTACAGCTATTGATAAGTTAATTACTATTTATAAGAAAGTCAAGTCCTAAGGTTTAAAATAAGAGAAAT
ATATATATAAAGAATTTTTT

Downstream 100 bases:

>100_bases
TTATTTGATTTTGTGGGGAAAAAAAGTTTGATTTAAGGAAATATGAGGAATATTAGCAATTGTATCAAATATATTATATT
AACAATGCTTATTGGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNTGAVKFKISLINHLGSVAIVY
DYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLA
EIARISGINFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS

Sequences:

>Translated_212_residues
MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNTGAVKFKISLINHLGSVAIVY
DYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLA
EIARISGINFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS
>Mature_212_residues
MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNTGAVKFKISLINHLGSVAIVY
DYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLLASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLA
EIARISGINFRVKCIERETGVLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24212; Mature: 24212

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNT
CEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCEEEEECCCC
GAVKFKISLINHLGSVAIVYDYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLL
CEEEEEEEEHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCEEECCEEEE
ASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLAEIARISGINFRVKCIERETG
ECCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCHHCHHHHHHHCCCCEEEEEEECHHH
VLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS
HHHHHHHEEEHHHCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLYLFTTKMKIKFLTISLAILLANLIIILLNLVLFIVNTSTSSPYIVPSEKIDILHQSNT
CEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCEEEEECCCC
GAVKFKISLINHLGSVAIVYDYNSASERFYLDFEIVTNKKPFNLLDVSLNDVVIKPEVLL
CEEEEEEEEHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCEEECCEEEE
ASNSKLRFEEGQYVLNFDDSIEKTGFFVDLDLRNEYLNLAEIARISGINFRVKCIERETG
ECCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCHHCHHHHHHHCCCCEEEEEEECHHH
VLRNVLFKLSVEKGKKFFDLIERYNNNIGKVS
HHHHHHHEEEHHHCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA