Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496877

Identifier: 11496877

GI number: 11496877

Start: 34905

End: 35591

Strand: Reverse

Name: 11496877

Synonym: BBJ47

Alternate gene names: NA

Gene position: 35591-34905 (Counterclockwise)

Preceding gene: 11496878

Following gene: 11496876

Centisome position: 91.66

GC content: 24.16

Gene sequence:

>687_bases
ATGAGGAATATTAGCAATTGTATCAAATATATTATATTAACAATGCTTATTGGATTATTAATTTTTTGTTGTGCAACCTT
TGTTTGGTTGATTGGAATTTTTTATTCAAATAACTTTAAAGAAGAGCGGAATTATTCAATAAGCCCAATAGATAGTGTTA
TTATGCGTAAATGTTATTTTAAAGAATTTAAGTCTGGACTTATTAAAAGCGTATTCTTTAAGAAATTAGATGTAAATGTT
AACTCTAAAAATTTTAAGGAGCTAAATAAGGTAGATAAACAAAATCTGCTAAATTCTTATCCATCTTATCATATGGAGTT
TGTCGTAGTTGATAATGGATTTTTAATGAATTTTAAAAATGTTATTTTTAATGGTATAGATGATGCTAAATTATACGATC
AACGTGATATGGTTTACGGAGGATTTAGATACTCAAAAGAGGCTTATTTCCAAATTATTGGCAATTATGATGTTAAATTA
AATAAAATGAAACAATATACTCCAGCAATTGTAGTAAATGTTTTCAAAATTAACATTAATGATGCTTTATTTAACTCGTT
ATTAAAGCAAAAAACTTTAAAAGTTACTTTGATTTCCCATAATAATAAAGAGTATATTTTACAAACTAATAATTTCTTAT
CAAAGTATAATTTTCAAACACCAGAAAAGGAGAATAGTTCTTACTAA

Upstream 100 bases:

>100_bases
TAAAAAATTCTTTGACCTTATTGAAAGATATAACAATAATATTGGCAAGGTTTCTTGATTATTTGATTTTGTGGGGAAAA
AAAGTTTGATTTAAGGAAAT

Downstream 100 bases:

>100_bases
GAAATTAAAGAATTTTATTTTAAGTTTAATAATGGGTTGATCATGTCTTATGGTCAGCAAACCAAATATGCCTCCCCTTT
ATCAGAGCAATTATTCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYFKEFKSGLIKSVFFKKLDVNV
NSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKL
NKMKQYTPAIVVNVFKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY

Sequences:

>Translated_228_residues
MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYFKEFKSGLIKSVFFKKLDVNV
NSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKL
NKMKQYTPAIVVNVFKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY
>Mature_228_residues
MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYFKEFKSGLIKSVFFKKLDVNV
NSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKL
NKMKQYTPAIVVNVFKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26857; Mature: 26857

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
KEFKSGLIKSVFFKKLDVNVNSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHH
VIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKLNKMKQYTPAIVVNVFKININ
HHHCCCCCHHHHCCCCCEECCEECCHHHHEEEECCCCEEEHHHHHHCCEEEEEEEEEECC
DALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY
HHHHHHHHHHHHEEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
KEFKSGLIKSVFFKKLDVNVNSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHH
VIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKLNKMKQYTPAIVVNVFKININ
HHHCCCCCHHHHCCCCCEECCEECCHHHHEEEECCCCEEEHHHHHHCCEEEEEEEEEECC
DALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY
HHHHHHHHHHHHEEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA