Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496877
Identifier: 11496877
GI number: 11496877
Start: 34905
End: 35591
Strand: Reverse
Name: 11496877
Synonym: BBJ47
Alternate gene names: NA
Gene position: 35591-34905 (Counterclockwise)
Preceding gene: 11496878
Following gene: 11496876
Centisome position: 91.66
GC content: 24.16
Gene sequence:
>687_bases ATGAGGAATATTAGCAATTGTATCAAATATATTATATTAACAATGCTTATTGGATTATTAATTTTTTGTTGTGCAACCTT TGTTTGGTTGATTGGAATTTTTTATTCAAATAACTTTAAAGAAGAGCGGAATTATTCAATAAGCCCAATAGATAGTGTTA TTATGCGTAAATGTTATTTTAAAGAATTTAAGTCTGGACTTATTAAAAGCGTATTCTTTAAGAAATTAGATGTAAATGTT AACTCTAAAAATTTTAAGGAGCTAAATAAGGTAGATAAACAAAATCTGCTAAATTCTTATCCATCTTATCATATGGAGTT TGTCGTAGTTGATAATGGATTTTTAATGAATTTTAAAAATGTTATTTTTAATGGTATAGATGATGCTAAATTATACGATC AACGTGATATGGTTTACGGAGGATTTAGATACTCAAAAGAGGCTTATTTCCAAATTATTGGCAATTATGATGTTAAATTA AATAAAATGAAACAATATACTCCAGCAATTGTAGTAAATGTTTTCAAAATTAACATTAATGATGCTTTATTTAACTCGTT ATTAAAGCAAAAAACTTTAAAAGTTACTTTGATTTCCCATAATAATAAAGAGTATATTTTACAAACTAATAATTTCTTAT CAAAGTATAATTTTCAAACACCAGAAAAGGAGAATAGTTCTTACTAA
Upstream 100 bases:
>100_bases TAAAAAATTCTTTGACCTTATTGAAAGATATAACAATAATATTGGCAAGGTTTCTTGATTATTTGATTTTGTGGGGAAAA AAAGTTTGATTTAAGGAAAT
Downstream 100 bases:
>100_bases GAAATTAAAGAATTTTATTTTAAGTTTAATAATGGGTTGATCATGTCTTATGGTCAGCAAACCAAATATGCCTCCCCTTT ATCAGAGCAATTATTCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYFKEFKSGLIKSVFFKKLDVNV NSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKL NKMKQYTPAIVVNVFKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY
Sequences:
>Translated_228_residues MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYFKEFKSGLIKSVFFKKLDVNV NSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKL NKMKQYTPAIVVNVFKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY >Mature_228_residues MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYFKEFKSGLIKSVFFKKLDVNV NSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKNVIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKL NKMKQYTPAIVVNVFKININDALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26857; Mature: 26857
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH KEFKSGLIKSVFFKKLDVNVNSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKN HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHH VIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKLNKMKQYTPAIVVNVFKININ HHHCCCCCHHHHCCCCCEECCEECCHHHHEEEECCCCEEEHHHHHHCCEEEEEEEEEECC DALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY HHHHHHHHHHHHEEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRNISNCIKYIILTMLIGLLIFCCATFVWLIGIFYSNNFKEERNYSISPIDSVIMRKCYF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH KEFKSGLIKSVFFKKLDVNVNSKNFKELNKVDKQNLLNSYPSYHMEFVVVDNGFLMNFKN HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHH VIFNGIDDAKLYDQRDMVYGGFRYSKEAYFQIIGNYDVKLNKMKQYTPAIVVNVFKININ HHHCCCCCHHHHCCCCCEECCEECCHHHHEEEECCCCEEEHHHHHHCCEEEEEEEEEECC DALFNSLLKQKTLKVTLISHNNKEYILQTNNFLSKYNFQTPEKENSSY HHHHHHHHHHHHEEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA