Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496868
Identifier: 11496868
GI number: 11496868
Start: 17388
End: 18170
Strand: Direct
Name: 11496868
Synonym: BBJ24
Alternate gene names: NA
Gene position: 17388-18170 (Clockwise)
Preceding gene: 11496867
Following gene: 11496869
Centisome position: 44.78
GC content: 27.84
Gene sequence:
>783_bases ATGTTAAGGGCATTGTTAATTTTTTTAGTAAATATTAGCCTATTTTCTTTTGAAAAAGAGGTCAAAGTATATATAGATAA AATAGAAAGCGTTCATACTAAATATTGTTCTGGTAATTTTGAGTTTGATTTTTTTTCACCCGATAAAATTTTTACAAATG AGCTTCAAAACATAGAAAATGTTATTTTAATGAAATATAGAAGGGAAAGTATTCAATATAATTACTTAAATTTACTTATG TCTTTGGTTTTGTGTGACGTTTCTTACTTAATTAATGATCCACATAAATACAATGATTTGATTCAAAAACTAATTCGCAA TTATAATTGTGCTTTGAAAATTTCTTTAGAAGATGATAATGTTCCAGCGGATTATTTTAGGGCATTGGGAGAGCTTGCTA TAAATTTAATACCGCACAATAGGAAAGGATTGTATTCTTATTTTGTTAATGCCAAGAGGCATTTAGAAACAGCTTTAAAA ATAGATGGTGATAACGTTAAAGCTTTTATTCCCCTGTCTATTTTATATACAGTTAGAGTGTCAAATAGAGATTTTTATAA GATTCTATTTGCAAAAAGCTATATTGATAGAGCAGAAGACAGCAATCTTAATGATAGGCAAAAATATTTGAAAGAATTAG TGAAAAGTTCTTTTTTAATTCGCACTAATAGAAGATTGGAAGCAATTGAATGTTTAAAAAAAGCCACAGCCATATTCCCT AATGGGAATATGGCTGTGTTGGCAATTGAAAAATTAAAAGAGGGCAATTCTTTCTACTACTAG
Upstream 100 bases:
>100_bases AAGGCTGGAAATTTGTTTATGGATTTTCCTATAAAAAATTAGTTGAATAAGAAGTTAATATAACTCATTTAAGATTTATG AGTTATGAGATAATTTTTAT
Downstream 100 bases:
>100_bases AAAATTATTTAGAATTTAATTTCAATGAAGATTGAAGGTATTCATGAAAAAGTTTTTATTTTTAATATTGCCCTGTTTTG GGGTGTTTGCAAATGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLRALLIFLVNISLFSFEKEVKVYIDKIESVHTKYCSGNFEFDFFSPDKIFTNELQNIENVILMKYRRESIQYNYLNLLM SLVLCDVSYLINDPHKYNDLIQKLIRNYNCALKISLEDDNVPADYFRALGELAINLIPHNRKGLYSYFVNAKRHLETALK IDGDNVKAFIPLSILYTVRVSNRDFYKILFAKSYIDRAEDSNLNDRQKYLKELVKSSFLIRTNRRLEAIECLKKATAIFP NGNMAVLAIEKLKEGNSFYY
Sequences:
>Translated_260_residues MLRALLIFLVNISLFSFEKEVKVYIDKIESVHTKYCSGNFEFDFFSPDKIFTNELQNIENVILMKYRRESIQYNYLNLLM SLVLCDVSYLINDPHKYNDLIQKLIRNYNCALKISLEDDNVPADYFRALGELAINLIPHNRKGLYSYFVNAKRHLETALK IDGDNVKAFIPLSILYTVRVSNRDFYKILFAKSYIDRAEDSNLNDRQKYLKELVKSSFLIRTNRRLEAIECLKKATAIFP NGNMAVLAIEKLKEGNSFYY >Mature_260_residues MLRALLIFLVNISLFSFEKEVKVYIDKIESVHTKYCSGNFEFDFFSPDKIFTNELQNIENVILMKYRRESIQYNYLNLLM SLVLCDVSYLINDPHKYNDLIQKLIRNYNCALKISLEDDNVPADYFRALGELAINLIPHNRKGLYSYFVNAKRHLETALK IDGDNVKAFIPLSILYTVRVSNRDFYKILFAKSYIDRAEDSNLNDRQKYLKELVKSSFLIRTNRRLEAIECLKKATAIFP NGNMAVLAIEKLKEGNSFYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30485; Mature: 30485
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALLIFLVNISLFSFEKEVKVYIDKIESVHTKYCSGNFEFDFFSPDKIFTNELQNIEN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH VILMKYRRESIQYNYLNLLMSLVLCDVSYLINDPHKYNDLIQKLIRNYNCALKISLEDDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC VPADYFRALGELAINLIPHNRKGLYSYFVNAKRHLETALKIDGDNVKAFIPLSILYTVRV CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEEEEEE SNRDFYKILFAKSYIDRAEDSNLNDRQKYLKELVKSSFLIRTNRRLEAIECLKKATAIFP CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHEECC NGNMAVLAIEKLKEGNSFYY CCCEEEEEEEHHCCCCCCCC >Mature Secondary Structure MLRALLIFLVNISLFSFEKEVKVYIDKIESVHTKYCSGNFEFDFFSPDKIFTNELQNIEN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH VILMKYRRESIQYNYLNLLMSLVLCDVSYLINDPHKYNDLIQKLIRNYNCALKISLEDDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC VPADYFRALGELAINLIPHNRKGLYSYFVNAKRHLETALKIDGDNVKAFIPLSILYTVRV CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEEEEEE SNRDFYKILFAKSYIDRAEDSNLNDRQKYLKELVKSSFLIRTNRRLEAIECLKKATAIFP CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHEECC NGNMAVLAIEKLKEGNSFYY CCCEEEEEEEHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA