Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496867
Identifier: 11496867
GI number: 11496867
Start: 16505
End: 17329
Strand: Direct
Name: 11496867
Synonym: BBJ23
Alternate gene names: NA
Gene position: 16505-17329 (Clockwise)
Preceding gene: 11496865
Following gene: 11496868
Centisome position: 42.51
GC content: 30.91
Gene sequence:
>825_bases TTGAATGGGGTAATTATGAGAGAAATTAGTTGTTGTTTTTTATTATTAACTTTTAGTGTTGTTTGTGTATATTCATTTGA TGTTTCAAGTAGAAAATTTTATGGCATATTGGAAGGTTATTATTCGGGCAAAATTGAGGAATTGTCAAAAAAAAATGATG AAGATGTCTATATATATAGGTTTGGTAAATTTAAAGAAACATTGAGCGAAATGAGCTCCGGCATCAAGTCATATTTTTTT AATCTTGTTGATTACCAAATTGCCAGACTTCTTCAGAATAAAGAAGGAAGAAGGAATTCTTCTAAAAGTTATTCTGTTTT AAAATCCACTCAAAAATCTCTTTTAGAGCTCATTGCATCAACAGATTTTAAAGGTTTGGAAAAAACCATTCAAAGCGATA TTTGCAGGATCTTGGGAGATGTTAATTTAATGCTTTTGAGGTATGCGGGAGGTGCAGCTTTAAGCAAGCTTGCAAATGAG GCTAGAAAATATTTTGAAAAGTCCTTAAAAATTAATAGTAAAAACTCATTTGCCAACACTTCTCTTGCAAGTTGGTATTT ATATGCTCCAAGGATTGCGGGGGGAGATCCAAATAAAACTTTGTCATTTGCTCAATTAGGATTTAAATATGGTCAAACAG ATGTGGAAAAATATTTTGCAAATATATGGATAAGTCAAGCTCATTTCCTTCTTAAAAATGAAAAAGAAAGCCTTAAATAT ATACTCAAAGCTGGTGAAATATTTCCCAACGGAGCTTTTCACAAGATAGTTCTAGAACAAAACAAGGCTGGAAATTTGTT TATGGATTTTCCTATAAAAAATTAG
Upstream 100 bases:
>100_bases GGGTTAAGATCAAATTTCAAAAATGAGTGTACAGTATTGAATTTATTTTTTTTATTATTTTTTCAAAAAAATTAGAATTT ATTAAGTACTGAACTAAAGT
Downstream 100 bases:
>100_bases TTGAATAAGAAGTTAATATAACTCATTTAAGATTTATGAGTTATGAGATAATTTTTATATGTTAAGGGCATTGTTAATTT TTTTAGTAAATATTAGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNGVIMREISCCFLLLTFSVVCVYSFDVSSRKFYGILEGYYSGKIEELSKKNDEDVYIYRFGKFKETLSEMSSGIKSYFF NLVDYQIARLLQNKEGRRNSSKSYSVLKSTQKSLLELIASTDFKGLEKTIQSDICRILGDVNLMLLRYAGGAALSKLANE ARKYFEKSLKINSKNSFANTSLASWYLYAPRIAGGDPNKTLSFAQLGFKYGQTDVEKYFANIWISQAHFLLKNEKESLKY ILKAGEIFPNGAFHKIVLEQNKAGNLFMDFPIKN
Sequences:
>Translated_274_residues MNGVIMREISCCFLLLTFSVVCVYSFDVSSRKFYGILEGYYSGKIEELSKKNDEDVYIYRFGKFKETLSEMSSGIKSYFF NLVDYQIARLLQNKEGRRNSSKSYSVLKSTQKSLLELIASTDFKGLEKTIQSDICRILGDVNLMLLRYAGGAALSKLANE ARKYFEKSLKINSKNSFANTSLASWYLYAPRIAGGDPNKTLSFAQLGFKYGQTDVEKYFANIWISQAHFLLKNEKESLKY ILKAGEIFPNGAFHKIVLEQNKAGNLFMDFPIKN >Mature_274_residues MNGVIMREISCCFLLLTFSVVCVYSFDVSSRKFYGILEGYYSGKIEELSKKNDEDVYIYRFGKFKETLSEMSSGIKSYFF NLVDYQIARLLQNKEGRRNSSKSYSVLKSTQKSLLELIASTDFKGLEKTIQSDICRILGDVNLMLLRYAGGAALSKLANE ARKYFEKSLKINSKNSFANTSLASWYLYAPRIAGGDPNKTLSFAQLGFKYGQTDVEKYFANIWISQAHFLLKNEKESLKY ILKAGEIFPNGAFHKIVLEQNKAGNLFMDFPIKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31221; Mature: 31221
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGVIMREISCCFLLLTFSVVCVYSFDVSSRKFYGILEGYYSGKIEELSKKNDEDVYIYR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEEEEE FGKFKETLSEMSSGIKSYFFNLVDYQIARLLQNKEGRRNSSKSYSVLKSTQKSLLELIAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC TDFKGLEKTIQSDICRILGDVNLMLLRYAGGAALSKLANEARKYFEKSLKINSKNSFANT CCCHHHHHHHHHHHHHHHCCHHEEEHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SLASWYLYAPRIAGGDPNKTLSFAQLGFKYGQTDVEKYFANIWISQAHFLLKNEKESLKY HHHHEEEECCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ILKAGEIFPNGAFHKIVLEQNKAGNLFMDFPIKN HHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCC >Mature Secondary Structure MNGVIMREISCCFLLLTFSVVCVYSFDVSSRKFYGILEGYYSGKIEELSKKNDEDVYIYR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEEEEE FGKFKETLSEMSSGIKSYFFNLVDYQIARLLQNKEGRRNSSKSYSVLKSTQKSLLELIAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC TDFKGLEKTIQSDICRILGDVNLMLLRYAGGAALSKLANEARKYFEKSLKINSKNSFANT CCCHHHHHHHHHHHHHHHCCHHEEEHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SLASWYLYAPRIAGGDPNKTLSFAQLGFKYGQTDVEKYFANIWISQAHFLLKNEKESLKY HHHHEEEECCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ILKAGEIFPNGAFHKIVLEQNKAGNLFMDFPIKN HHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA