Definition | Borrelia burgdorferi B31 plasmid lp36, complete sequence. |
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Accession | NC_001855 |
Length | 36,849 |
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The map label for this gene is 11496820
Identifier: 11496820
GI number: 11496820
Start: 12602
End: 13237
Strand: Direct
Name: 11496820
Synonym: BBK19
Alternate gene names: NA
Gene position: 12602-13237 (Clockwise)
Preceding gene: 11496787
Following gene: 11496821
Centisome position: 34.2
GC content: 27.2
Gene sequence:
>636_bases TTGAAAAAATATATTATCAATTTAAGTTTATGTTTATTATTGCTTTCATGCAATCTTTTTTCAAAAGATTCTCGATCACG CCAAAAATACAATTTTAAAGTACCCGCTAAATCGGTTTCAAATCCTATCAATAAAGAAAATATAGACACTGAAAAAGGTA CTAACACTACACTTTGCATAAAAGAAAAAGATAGCAGAATTATAATTAAAGATTGTATTAATAATCAAGAGCTTTTTAAA GTAAAATCTAAAAGAAGATATGATTTTAAAAAAGCCATGCTTCTTGGAATTCAAACAGCTTTAAAAGTTATAAATATTGG CAATAATAATAAAAAATTAACTTCCATAAAAAAACATAATGATCATATTTTATTAGAATTTAAAGATAATAAGATATATA TAATTCGATTATCTGAACTTAAAAAACATTTACTAAAAAGCAAGAAAAAACCACTATTAGGAAGTCCGATACCGGGCGGC GGAGATGCAGAATTTGTAGATGATCCTGATGGCAGAATAGAAGCAGAATTAGAGGCAGAACAAGAGCAAGAGATGTTAGA TAGAGAAGATTTTGGAGACGAAGAAGACGAAGAATTAGAAGAAGAAATATTTGGAAAAGAAAAACCTAACAATTGA
Upstream 100 bases:
>100_bases ATATTTATTAATTATAATATCAATATTATTGGGAAATAGTTAATAAAAAATTAAACATATACTTTTAAATAAAGTAAATA TTAAATTAAGGAGTTATAAA
Downstream 100 bases:
>100_bases AACTAAAATACTACATTTCAATAAAATAAAGAAGCCCCTAAAAATAGGGGCTTCTTTATTTTATTGAAATGTAACTTGCT AAAGCCACTGTAAATCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKKYIINLSLCLLLLSCNLFSKDSRSRQKYNFKVPAKSVSNPINKENIDTEKGTNTTLCIKEKDSRIIIKDCINNQELFK VKSKRRYDFKKAMLLGIQTALKVINIGNNNKKLTSIKKHNDHILLEFKDNKIYIIRLSELKKHLLKSKKKPLLGSPIPGG GDAEFVDDPDGRIEAELEAEQEQEMLDREDFGDEEDEELEEEIFGKEKPNN
Sequences:
>Translated_211_residues MKKYIINLSLCLLLLSCNLFSKDSRSRQKYNFKVPAKSVSNPINKENIDTEKGTNTTLCIKEKDSRIIIKDCINNQELFK VKSKRRYDFKKAMLLGIQTALKVINIGNNNKKLTSIKKHNDHILLEFKDNKIYIIRLSELKKHLLKSKKKPLLGSPIPGG GDAEFVDDPDGRIEAELEAEQEQEMLDREDFGDEEDEELEEEIFGKEKPNN >Mature_211_residues MKKYIINLSLCLLLLSCNLFSKDSRSRQKYNFKVPAKSVSNPINKENIDTEKGTNTTLCIKEKDSRIIIKDCINNQELFK VKSKRRYDFKKAMLLGIQTALKVINIGNNNKKLTSIKKHNDHILLEFKDNKIYIIRLSELKKHLLKSKKKPLLGSPIPGG GDAEFVDDPDGRIEAELEAEQEQEMLDREDFGDEEDEELEEEIFGKEKPNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24326; Mature: 24326
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYIINLSLCLLLLSCNLFSKDSRSRQKYNFKVPAKSVSNPINKENIDTEKGTNTTLCI CCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCEEEE KEKDSRIIIKDCINNQELFKVKSKRRYDFKKAMLLGIQTALKVINIGNNNKKLTSIKKHN EECCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCC DHILLEFKDNKIYIIRLSELKKHLLKSKKKPLLGSPIPGGGDAEFVDDPDGRIEAELEAE CEEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHH QEQEMLDREDFGDEEDEELEEEIFGKEKPNN HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKYIINLSLCLLLLSCNLFSKDSRSRQKYNFKVPAKSVSNPINKENIDTEKGTNTTLCI CCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCEEEE KEKDSRIIIKDCINNQELFKVKSKRRYDFKKAMLLGIQTALKVINIGNNNKKLTSIKKHN EECCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCC DHILLEFKDNKIYIIRLSELKKHLLKSKKKPLLGSPIPGGGDAEFVDDPDGRIEAELEAE CEEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHH QEQEMLDREDFGDEEDEELEEEIFGKEKPNN HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA