Definition | Borrelia burgdorferi B31 plasmid lp36, complete sequence. |
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Accession | NC_001855 |
Length | 36,849 |
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The map label for this gene is 11496790
Identifier: 11496790
GI number: 11496790
Start: 14302
End: 14841
Strand: Reverse
Name: 11496790
Synonym: BBK22
Alternate gene names: NA
Gene position: 14841-14302 (Counterclockwise)
Preceding gene: 11496822
Following gene: 11496789
Centisome position: 40.28
GC content: 21.85
Gene sequence:
>540_bases TTGAGTAATTTGCTTGAAAAACTCAGAAACAAAAAAAGTGATATAGAAAAAAGAATTATATTCAATAGAATTGAAGAAAT AGATAGTAGAAAAATATACTGTACAAAAATATTTAAACATTTAGTTAGTTTTAAAATTACAAACAAAGGAAAAAGGCTAA GACTTACTTTTCAAGAATTTAATAACAATGAAGATTTTCTTTTCTTCAATTTATTTCCTTTAAGAGAAAATGATAAGTTC CTAGAAATAAAATATAAGCATGATAAACTTGATAGACCCTTTTTTCTTAAAAAAGAAAATAATAAAACTTATGCAATAAA AAAGCTCTATTATATAGAGTTTGTCTTTAAAAATGGCTCTATTAAAGCCTATGTTCAATCTTTAAGAACACTTTTAAGAA AAAATAAAGAAACTACCGAGTATTATCAATTCAATTTATCACATTTGAAAAAAATGGAAAAAAAAGTATATGAATTTTAT AATAAAAAACTAAAAGATGGGGGGGTTATAAATAAATGGATCAAAAAAAACCAATTGTAA
Upstream 100 bases:
>100_bases ACTACTAAATGGAAAGCAGATAAAATAACTAGCTTTTCAGGACATGCTGGTACAATAGCCAATAATATTTTATCTAAAAT TTTGTCAAAGGGATTGAAAT
Downstream 100 bases:
>100_bases TTACACTTGCAAGTTTAAAAGGAGGAGTCGGCAAAAGTTCACTTTCTATACTTTTTTCTTATGTTTTAAAAGAATTGGGG AAAAAAGTGCTACTGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSNLLEKLRNKKSDIEKRIIFNRIEEIDSRKIYCTKIFKHLVSFKITNKGKRLRLTFQEFNNNEDFLFFNLFPLRENDKF LEIKYKHDKLDRPFFLKKENNKTYAIKKLYYIEFVFKNGSIKAYVQSLRTLLRKNKETTEYYQFNLSHLKKMEKKVYEFY NKKLKDGGVINKWIKKNQL
Sequences:
>Translated_179_residues MSNLLEKLRNKKSDIEKRIIFNRIEEIDSRKIYCTKIFKHLVSFKITNKGKRLRLTFQEFNNNEDFLFFNLFPLRENDKF LEIKYKHDKLDRPFFLKKENNKTYAIKKLYYIEFVFKNGSIKAYVQSLRTLLRKNKETTEYYQFNLSHLKKMEKKVYEFY NKKLKDGGVINKWIKKNQL >Mature_178_residues SNLLEKLRNKKSDIEKRIIFNRIEEIDSRKIYCTKIFKHLVSFKITNKGKRLRLTFQEFNNNEDFLFFNLFPLRENDKFL EIKYKHDKLDRPFFLKKENNKTYAIKKLYYIEFVFKNGSIKAYVQSLRTLLRKNKETTEYYQFNLSHLKKMEKKVYEFYN KKLKDGGVINKWIKKNQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22050; Mature: 21919
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLEKLRNKKSDIEKRIIFNRIEEIDSRKIYCTKIFKHLVSFKITNKGKRLRLTFQEF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECC NNNEDFLFFNLFPLRENDKFLEIKYKHDKLDRPFFLKKENNKTYAIKKLYYIEFVFKNGS CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEEEECCC IKAYVQSLRTLLRKNKETTEYYQFNLSHLKKMEKKVYEFYNKKLKDGGVINKWIKKNQL HHHHHHHHHHHHHCCCCCHHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure SNLLEKLRNKKSDIEKRIIFNRIEEIDSRKIYCTKIFKHLVSFKITNKGKRLRLTFQEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECC NNNEDFLFFNLFPLRENDKFLEIKYKHDKLDRPFFLKKENNKTYAIKKLYYIEFVFKNGS CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEEEECCC IKAYVQSLRTLLRKNKETTEYYQFNLSHLKKMEKKVYEFYNKKLKDGGVINKWIKKNQL HHHHHHHHHHHHHCCCCCHHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA