Definition | Borrelia burgdorferi B31 plasmid lp36, complete sequence. |
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Accession | NC_001855 |
Length | 36,849 |
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The map label for this gene is soj [H]
Identifier: 11496789
GI number: 11496789
Start: 13577
End: 14326
Strand: Reverse
Name: soj [H]
Synonym: BBK21
Alternate gene names: 11496789
Gene position: 14326-13577 (Counterclockwise)
Preceding gene: 11496790
Following gene: 11496788
Centisome position: 38.88
GC content: 23.73
Gene sequence:
>750_bases ATGGATCAAAAAAAACCAATTGTAATTACACTTGCAAGTTTAAAAGGAGGAGTCGGCAAAAGTTCACTTTCTATACTTTT TTCTTATGTTTTAAAAGAATTGGGGAAAAAAGTGCTACTGATTGATTTAGATCCACAAAATTCTTTAACTTCTTATTTTA ATAAGTATATTTCAAGTATTAAAAAGTATAACGTTTATGAATTTTTAAAAGGAAATACGTATTTTGATAAATGTGAAAAT AAAATTAATGAATTTATTTCTATAATTCCCTCTCATCCTATTTTAGAAAAATTTAACACGGATGATATAGATTATAAAGA AATTATTTTAGAATTTAGATTAAATAAGAGCACCAAAAGTTTTGATTTTGATTATATTATAATAGATACTTCTCCTAGTA GGAATTTCCTTTTAAAGAATGCTCTAAATGTTACAGACCATATTATAATCCCAGTTCAAGTAGAAAGATGGTCAATAGAA AGCTTTTCTATTTTAACAGAAACAATAAATAATATTCAGATCATTAAAAACAAAAGATATAATATTTCTATTATAGAAAA CCAATTTATTAAAAATAGGAATACCTTAAAAGAGGTAGAAGAAGTGCTTTATGAAAAGTATGGCAAATATATAAAAGGTA AAATTCACTTTTCAAATAGTATAAAAGTTTTTATAAATGACCTTTTAGAGCCTTCTTTGAAAGAAATTTATTATAGGGAA GCTGAAAGCGCTTTAAAAAATATACTGTAA
Upstream 100 bases:
>100_bases CCGAGTATTATCAATTCAATTTATCACATTTGAAAAAAATGGAAAAAAAAGTATATGAATTTTATAATAAAAAACTAAAA GATGGGGGGGTTATAAATAA
Downstream 100 bases:
>100_bases ATCGCTATTCTGCTAATTGCTGGATTTTAGAAATAAAAATTATAAAGAATTTTACCTAATTGGTTTTGATGATCTTAAAA ATATAAAATTAACCATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSIKKYNVYEFLKGNTYFDKCEN KINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIE SFSILTETINNIQIIKNKRYNISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE AESALKNIL
Sequences:
>Translated_249_residues MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSIKKYNVYEFLKGNTYFDKCEN KINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIE SFSILTETINNIQIIKNKRYNISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE AESALKNIL >Mature_249_residues MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSIKKYNVYEFLKGNTYFDKCEN KINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIE SFSILTETINNIQIIKNKRYNISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE AESALKNIL
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29091; Mature: 29091
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSI CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH KKYNVYEFLKGNTYFDKCENKINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKS HHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCC FDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIESFSILTETINNIQIIKNKRY CCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHCCEEEEECCCE NISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE EEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHH AESALKNIL HHHHHHHCC >Mature Secondary Structure MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSI CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH KKYNVYEFLKGNTYFDKCENKINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKS HHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCC FDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIESFSILTETINNIQIIKNKRY CCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHCCEEEEECCCE NISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE EEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHH AESALKNIL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]