Definition Borrelia burgdorferi B31 plasmid lp36, complete sequence.
Accession NC_001855
Length 36,849

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The map label for this gene is soj [H]

Identifier: 11496789

GI number: 11496789

Start: 13577

End: 14326

Strand: Reverse

Name: soj [H]

Synonym: BBK21

Alternate gene names: 11496789

Gene position: 14326-13577 (Counterclockwise)

Preceding gene: 11496790

Following gene: 11496788

Centisome position: 38.88

GC content: 23.73

Gene sequence:

>750_bases
ATGGATCAAAAAAAACCAATTGTAATTACACTTGCAAGTTTAAAAGGAGGAGTCGGCAAAAGTTCACTTTCTATACTTTT
TTCTTATGTTTTAAAAGAATTGGGGAAAAAAGTGCTACTGATTGATTTAGATCCACAAAATTCTTTAACTTCTTATTTTA
ATAAGTATATTTCAAGTATTAAAAAGTATAACGTTTATGAATTTTTAAAAGGAAATACGTATTTTGATAAATGTGAAAAT
AAAATTAATGAATTTATTTCTATAATTCCCTCTCATCCTATTTTAGAAAAATTTAACACGGATGATATAGATTATAAAGA
AATTATTTTAGAATTTAGATTAAATAAGAGCACCAAAAGTTTTGATTTTGATTATATTATAATAGATACTTCTCCTAGTA
GGAATTTCCTTTTAAAGAATGCTCTAAATGTTACAGACCATATTATAATCCCAGTTCAAGTAGAAAGATGGTCAATAGAA
AGCTTTTCTATTTTAACAGAAACAATAAATAATATTCAGATCATTAAAAACAAAAGATATAATATTTCTATTATAGAAAA
CCAATTTATTAAAAATAGGAATACCTTAAAAGAGGTAGAAGAAGTGCTTTATGAAAAGTATGGCAAATATATAAAAGGTA
AAATTCACTTTTCAAATAGTATAAAAGTTTTTATAAATGACCTTTTAGAGCCTTCTTTGAAAGAAATTTATTATAGGGAA
GCTGAAAGCGCTTTAAAAAATATACTGTAA

Upstream 100 bases:

>100_bases
CCGAGTATTATCAATTCAATTTATCACATTTGAAAAAAATGGAAAAAAAAGTATATGAATTTTATAATAAAAAACTAAAA
GATGGGGGGGTTATAAATAA

Downstream 100 bases:

>100_bases
ATCGCTATTCTGCTAATTGCTGGATTTTAGAAATAAAAATTATAAAGAATTTTACCTAATTGGTTTTGATGATCTTAAAA
ATATAAAATTAACCATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSIKKYNVYEFLKGNTYFDKCEN
KINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIE
SFSILTETINNIQIIKNKRYNISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE
AESALKNIL

Sequences:

>Translated_249_residues
MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSIKKYNVYEFLKGNTYFDKCEN
KINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIE
SFSILTETINNIQIIKNKRYNISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE
AESALKNIL
>Mature_249_residues
MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSIKKYNVYEFLKGNTYFDKCEN
KINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKSFDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIE
SFSILTETINNIQIIKNKRYNISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE
AESALKNIL

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29091; Mature: 29091

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSI
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH
KKYNVYEFLKGNTYFDKCENKINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKS
HHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCC
FDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIESFSILTETINNIQIIKNKRY
CCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHCCEEEEECCCE
NISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE
EEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHH
AESALKNIL
HHHHHHHCC
>Mature Secondary Structure
MDQKKPIVITLASLKGGVGKSSLSILFSYVLKELGKKVLLIDLDPQNSLTSYFNKYISSI
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH
KKYNVYEFLKGNTYFDKCENKINEFISIIPSHPILEKFNTDDIDYKEIILEFRLNKSTKS
HHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCC
FDFDYIIIDTSPSRNFLLKNALNVTDHIIIPVQVERWSIESFSILTETINNIQIIKNKRY
CCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHCCEEEEECCCE
NISIIENQFIKNRNTLKEVEEVLYEKYGKYIKGKIHFSNSIKVFINDLLEPSLKEIYYRE
EEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHH
AESALKNIL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]