Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
---|---|
Accession | NC_001853 |
Length | 28,601 |
Click here to switch to the map view.
The map label for this gene is 11496723
Identifier: 11496723
GI number: 11496723
Start: 16519
End: 17415
Strand: Direct
Name: 11496723
Synonym: BBH26
Alternate gene names: NA
Gene position: 16519-17415 (Clockwise)
Preceding gene: 11496721
Following gene: 11496705
Centisome position: 57.76
GC content: 23.63
Gene sequence:
>897_bases ATGAAACCAGCCATATCTAATCATAACCACCAAACCAATAAAAATAAACTACTTGGTAAAATCTGTAGACTGAAAAAAAT TATTTCAGTAATCAATTACTTAAATAAAGAATTTAAAAAAAAATATAATACCTCAATTAATAAAGAACACTTTACTTCTA AAAAAGTAAAAGAACTTCGAGTTCATCATCAAGGAGATATCCTTCGCGTACTAAACTCAAATATACATAGAGAAAACAAA AAAGAAACCACAATTAATACTCTAAGACTAGATTTAAAATTTTTGGTTAAGCTAAAAGCATTAGAAAAAAGAATACTAAC ATTTTCAAATAGCTTCGGAGAATTTAAAGGAAAGCTTTGTATATATAAAGTGTCGCCTATTGCATATAAATTGATTAATG CATATTTTAATAACACTAAAATAGACTTACTTAAAAAAGTAAAGGAAGAGAAAGAATCTTTTAAGCCTAAAAATATCACT GAAAATATCACTGTATATAATAAACAATATATAAATATATATAATAAGAATTCTATAGAAAACTCTTTCTTTAAAAGAAT TAAATCAATAATTTTCAATGCAAAAGAACCAACTAAATCATTAAAAAATACTTTATTAAACTATAAAGATTTTAAAAATT ATCTAAAATATGATTATGAGACAAAAGATATTAAAGAGTTTTTCTTATCTAAGCTAAGTCTTTATAAACATAAAATTCAC TTTATGAGGAAAACCGCACCCTATAAAACTGATTTTTACACTCTTGCAGGAGAATTTAAAGATACTTATACTACTAAATG GAAGGTAAATAAAATAACTAGCTTTTCAGGACATGCTAGGATAATAGCCAATAATATTCTGGTTAACACTTTAAAAAAAG GATTAAAATTTGAGTAA
Upstream 100 bases:
>100_bases AAAATAATAAAATATTTAGTTAGGTATTGAAATTAATCAAATATTTTGAATATAATTAAAGCAATTATTGATAAAAATAC ACTGAACATGGAGATTAAAA
Downstream 100 bases:
>100_bases ATTACTTGAAAAACTAAAACAAAAAAAAACTTTAATGAAAATTGACAATATTTTAATTAAAAAAGATATTTTTAGCAAAA TAGAAGAAATAGATGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKPAISNHNHQTNKNKLLGKICRLKKIISVINYLNKEFKKKYNTSINKEHFTSKKVKELRVHHQGDILRVLNSNIHRENK KETTINTLRLDLKFLVKLKALEKRILTFSNSFGEFKGKLCIYKVSPIAYKLINAYFNNTKIDLLKKVKEEKESFKPKNIT ENITVYNKQYINIYNKNSIENSFFKRIKSIIFNAKEPTKSLKNTLLNYKDFKNYLKYDYETKDIKEFFLSKLSLYKHKIH FMRKTAPYKTDFYTLAGEFKDTYTTKWKVNKITSFSGHARIIANNILVNTLKKGLKFE
Sequences:
>Translated_298_residues MKPAISNHNHQTNKNKLLGKICRLKKIISVINYLNKEFKKKYNTSINKEHFTSKKVKELRVHHQGDILRVLNSNIHRENK KETTINTLRLDLKFLVKLKALEKRILTFSNSFGEFKGKLCIYKVSPIAYKLINAYFNNTKIDLLKKVKEEKESFKPKNIT ENITVYNKQYINIYNKNSIENSFFKRIKSIIFNAKEPTKSLKNTLLNYKDFKNYLKYDYETKDIKEFFLSKLSLYKHKIH FMRKTAPYKTDFYTLAGEFKDTYTTKWKVNKITSFSGHARIIANNILVNTLKKGLKFE >Mature_298_residues MKPAISNHNHQTNKNKLLGKICRLKKIISVINYLNKEFKKKYNTSINKEHFTSKKVKELRVHHQGDILRVLNSNIHRENK KETTINTLRLDLKFLVKLKALEKRILTFSNSFGEFKGKLCIYKVSPIAYKLINAYFNNTKIDLLKKVKEEKESFKPKNIT ENITVYNKQYINIYNKNSIENSFFKRIKSIIFNAKEPTKSLKNTLLNYKDFKNYLKYDYETKDIKEFFLSKLSLYKHKIH FMRKTAPYKTDFYTLAGEFKDTYTTKWKVNKITSFSGHARIIANNILVNTLKKGLKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35377; Mature: 35377
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAISNHNHQTNKNKLLGKICRLKKIISVINYLNKEFKKKYNTSINKEHFTSKKVKELR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VHHQGDILRVLNSNIHRENKKETTINTLRLDLKFLVKLKALEKRILTFSNSFGEFKGKLC HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEE IYKVSPIAYKLINAYFNNTKIDLLKKVKEEKESFKPKNITENITVYNKQYINIYNKNSIE EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECEEEEEEECCCCCH NSFFKRIKSIIFNAKEPTKSLKNTLLNYKDFKNYLKYDYETKDIKEFFLSKLSLYKHKIH HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FMRKTAPYKTDFYTLAGEFKDTYTTKWKVNKITSFSGHARIIANNILVNTLKKGLKFE HHHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKPAISNHNHQTNKNKLLGKICRLKKIISVINYLNKEFKKKYNTSINKEHFTSKKVKELR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VHHQGDILRVLNSNIHRENKKETTINTLRLDLKFLVKLKALEKRILTFSNSFGEFKGKLC HHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEE IYKVSPIAYKLINAYFNNTKIDLLKKVKEEKESFKPKNITENITVYNKQYINIYNKNSIE EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECEEEEEEECCCCCH NSFFKRIKSIIFNAKEPTKSLKNTLLNYKDFKNYLKYDYETKDIKEFFLSKLSLYKHKIH HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FMRKTAPYKTDFYTLAGEFKDTYTTKWKVNKITSFSGHARIIANNILVNTLKKGLKFE HHHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA