Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496705
Identifier: 11496705
GI number: 11496705
Start: 17408
End: 17974
Strand: Direct
Name: 11496705
Synonym: BBH27
Alternate gene names: NA
Gene position: 17408-17974 (Clockwise)
Preceding gene: 11496723
Following gene: 11496706
Centisome position: 60.87
GC content: 21.34
Gene sequence:
>567_bases TTGAGTAAATTACTTGAAAAACTAAAACAAAAAAAAACTTTAATGAAAATTGACAATATTTTAATTAAAAAAGATATTTT TAGCAAAATAGAAGAAATAGATGGAAAAAAAGTATACTATACGAAAATATTTAAACATTTAATTGATTTTAAAGTTACTA ACAAAGAACAAAGATTAAGACTTGTATTCCAAGAATTTAATAATAACAATAAAGATTATTATTTTTTTAATCTTTTTTCA TTGGGAAAAAATGATAAATTTTTGGGAATAAAATATGGATGGGATTACCTTGAAAAACCCTTCTTTCTTAAAAAAGAAGA CAATAAAATTTATGCAATAAAGAAACTCTATTATATAGAGTTTAGGTTTAAAAAAGGATCCGTCAAGTCTTACATATTAT CTTTAAGAACTTTGTTGAGAAAAAATGAAAAAGAAAGCACTGAGTATTATCAGTTTACGCTAAATCATCTAGAAAAAATG GAAAGTAAAGTATACAAATTTTACAATAAAAAATCACCGGATGGAGGAATTTTAAAAAAATGGATATTAAAAAATCAGAT ATTATAA
Upstream 100 bases:
>100_bases ACTACTAAATGGAAGGTAAATAAAATAACTAGCTTTTCAGGACATGCTAGGATAATAGCCAATAATATTCTGGTTAACAC TTTAAAAAAAGGATTAAAAT
Downstream 100 bases:
>100_bases CAATGGCTTCAATTAAGGGAGGAGTCGGAAAAAGTGTGCTTTCTATACTTTTTTCTTATGTATTAAAGGAATTGGGCAAA AAGGTGCTTCTAATTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSKLLEKLKQKKTLMKIDNILIKKDIFSKIEEIDGKKVYYTKIFKHLIDFKVTNKEQRLRLVFQEFNNNNKDYYFFNLFS LGKNDKFLGIKYGWDYLEKPFFLKKEDNKIYAIKKLYYIEFRFKKGSVKSYILSLRTLLRKNEKESTEYYQFTLNHLEKM ESKVYKFYNKKSPDGGILKKWILKNQIL
Sequences:
>Translated_188_residues MSKLLEKLKQKKTLMKIDNILIKKDIFSKIEEIDGKKVYYTKIFKHLIDFKVTNKEQRLRLVFQEFNNNNKDYYFFNLFS LGKNDKFLGIKYGWDYLEKPFFLKKEDNKIYAIKKLYYIEFRFKKGSVKSYILSLRTLLRKNEKESTEYYQFTLNHLEKM ESKVYKFYNKKSPDGGILKKWILKNQIL >Mature_187_residues SKLLEKLKQKKTLMKIDNILIKKDIFSKIEEIDGKKVYYTKIFKHLIDFKVTNKEQRLRLVFQEFNNNNKDYYFFNLFSL GKNDKFLGIKYGWDYLEKPFFLKKEDNKIYAIKKLYYIEFRFKKGSVKSYILSLRTLLRKNEKESTEYYQFTLNHLEKME SKVYKFYNKKSPDGGILKKWILKNQIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23004; Mature: 22873
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLEKLKQKKTLMKIDNILIKKDIFSKIEEIDGKKVYYTKIFKHLIDFKVTNKEQRLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCEECCHHHHHH LVFQEFNNNNKDYYFFNLFSLGKNDKFLGIKYGWDYLEKPFFLKKEDNKIYAIKKLYYIE HHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECHHHHCCCEEEEECCCEEEEEEEEEEEE FRFKKGSVKSYILSLRTLLRKNEKESTEYYQFTLNHLEKMESKVYKFYNKKSPDGGILKK EEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH WILKNQIL HHHHHCCC >Mature Secondary Structure SKLLEKLKQKKTLMKIDNILIKKDIFSKIEEIDGKKVYYTKIFKHLIDFKVTNKEQRLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCEECCHHHHHH LVFQEFNNNNKDYYFFNLFSLGKNDKFLGIKYGWDYLEKPFFLKKEDNKIYAIKKLYYIE HHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECHHHHCCCEEEEECCCEEEEEEEEEEEE FRFKKGSVKSYILSLRTLLRKNEKESTEYYQFTLNHLEKMESKVYKFYNKKSPDGGILKK EEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH WILKNQIL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA