Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496701
Identifier: 11496701
GI number: 11496701
Start: 27625
End: 28197
Strand: Reverse
Name: 11496701
Synonym: BBH41
Alternate gene names: NA
Gene position: 28197-27625 (Counterclockwise)
Preceding gene: NA
Following gene: 11496700
Centisome position: 98.59
GC content: 30.89
Gene sequence:
>573_bases ATGAAAAAAATTTTCACATTAATATTAATTTTTAGTTTAACGATGCAAATCTTTGCTTTAAATTTCACTTCAAAATATAA AATTCAGAAATATGCTGAAAGAGAAAAGGAGTTCATTCAAAACCAGAAATTAGAAAAAATTTTGAAAGACCCCGAAAAGA CTAAAAAGGCTCTTTTGCAATACGAAAAAGAACAATTGATAGATCTATGGATTCCAGTAATGTTAAATTTATTTTTACCT TTTGGAGTGGGGTCTTTTGTCCAAGGAGATTATATTGGAGGTGGCTGCACGCTTGGATTTAATTTGCTAGGATTAACCCT TTTAACAACTGGAGTTATTCAAATGAAAAATCTGAAAAAAGAACCTGCTAGTATATCTTCGATGATACTACTACTTTCAG GAATGCTCACGTTTGGATCATCCTACTTAATCTCAATTTATTTGCCAGTACTATTTGAAGATCGATACTACAAAAATCTT ATGAATCGAATCATTGATGAACTTGCGGGATTTGAACCCAATCTTGACATTGGAATGAACGGATTCCAACTGTCCTTTAA AAAAAGTTATTAA
Upstream 100 bases:
>100_bases TGCTCAACAACATCTTAAAAAATTCAATTCCAAAAATAAAATCTAAAAATTGCACTATTATTTAAATATCAAAACTTAAT TATTAGGAGGTAATATTAAT
Downstream 100 bases:
>100_bases TTAAATATGATAAAGATAATCTGCCTAATGTGGAGGGTAAAGATGAAGTACATAATATAGATGCGAAAGATTTTTATCTA AAAATAACAAAGAATACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQYEKEQLIDLWIPVMLNLFLP FGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKKEPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNL MNRIIDELAGFEPNLDIGMNGFQLSFKKSY
Sequences:
>Translated_190_residues MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQYEKEQLIDLWIPVMLNLFLP FGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKKEPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNL MNRIIDELAGFEPNLDIGMNGFQLSFKKSY >Mature_190_residues MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQYEKEQLIDLWIPVMLNLFLP FGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKKEPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNL MNRIIDELAGFEPNLDIGMNGFQLSFKKSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21813; Mature: 21813
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YEKEQLIDLWIPVMLNLFLPFGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKK HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNLMNRIIDELAGFEPNLDIGMN CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC GFQLSFKKSY CEEEEEECCC >Mature Secondary Structure MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YEKEQLIDLWIPVMLNLFLPFGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKK HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNLMNRIIDELAGFEPNLDIGMN CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC GFQLSFKKSY CEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA