Definition Borrelia burgdorferi B31 plasmid lp28-3, complete sequence.
Accession NC_001853
Length 28,601

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The map label for this gene is 11496701

Identifier: 11496701

GI number: 11496701

Start: 27625

End: 28197

Strand: Reverse

Name: 11496701

Synonym: BBH41

Alternate gene names: NA

Gene position: 28197-27625 (Counterclockwise)

Preceding gene: NA

Following gene: 11496700

Centisome position: 98.59

GC content: 30.89

Gene sequence:

>573_bases
ATGAAAAAAATTTTCACATTAATATTAATTTTTAGTTTAACGATGCAAATCTTTGCTTTAAATTTCACTTCAAAATATAA
AATTCAGAAATATGCTGAAAGAGAAAAGGAGTTCATTCAAAACCAGAAATTAGAAAAAATTTTGAAAGACCCCGAAAAGA
CTAAAAAGGCTCTTTTGCAATACGAAAAAGAACAATTGATAGATCTATGGATTCCAGTAATGTTAAATTTATTTTTACCT
TTTGGAGTGGGGTCTTTTGTCCAAGGAGATTATATTGGAGGTGGCTGCACGCTTGGATTTAATTTGCTAGGATTAACCCT
TTTAACAACTGGAGTTATTCAAATGAAAAATCTGAAAAAAGAACCTGCTAGTATATCTTCGATGATACTACTACTTTCAG
GAATGCTCACGTTTGGATCATCCTACTTAATCTCAATTTATTTGCCAGTACTATTTGAAGATCGATACTACAAAAATCTT
ATGAATCGAATCATTGATGAACTTGCGGGATTTGAACCCAATCTTGACATTGGAATGAACGGATTCCAACTGTCCTTTAA
AAAAAGTTATTAA

Upstream 100 bases:

>100_bases
TGCTCAACAACATCTTAAAAAATTCAATTCCAAAAATAAAATCTAAAAATTGCACTATTATTTAAATATCAAAACTTAAT
TATTAGGAGGTAATATTAAT

Downstream 100 bases:

>100_bases
TTAAATATGATAAAGATAATCTGCCTAATGTGGAGGGTAAAGATGAAGTACATAATATAGATGCGAAAGATTTTTATCTA
AAAATAACAAAGAATACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQYEKEQLIDLWIPVMLNLFLP
FGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKKEPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNL
MNRIIDELAGFEPNLDIGMNGFQLSFKKSY

Sequences:

>Translated_190_residues
MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQYEKEQLIDLWIPVMLNLFLP
FGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKKEPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNL
MNRIIDELAGFEPNLDIGMNGFQLSFKKSY
>Mature_190_residues
MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQYEKEQLIDLWIPVMLNLFLP
FGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKKEPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNL
MNRIIDELAGFEPNLDIGMNGFQLSFKKSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21813; Mature: 21813

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQ
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YEKEQLIDLWIPVMLNLFLPFGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKK
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNLMNRIIDELAGFEPNLDIGMN
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GFQLSFKKSY
CEEEEEECCC
>Mature Secondary Structure
MKKIFTLILIFSLTMQIFALNFTSKYKIQKYAEREKEFIQNQKLEKILKDPEKTKKALLQ
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YEKEQLIDLWIPVMLNLFLPFGVGSFVQGDYIGGGCTLGFNLLGLTLLTTGVIQMKNLKK
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EPASISSMILLLSGMLTFGSSYLISIYLPVLFEDRYYKNLMNRIIDELAGFEPNLDIGMN
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC
GFQLSFKKSY
CEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA