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The map label for this gene is ydcM [C]

Identifier: 11496700

GI number: 11496700

Start: 26978

End: 27445

Strand: Reverse

Name: ydcM [C]

Synonym: BBH40

Alternate gene names: 11496700

Gene position: 27445-26978 (Counterclockwise)

Preceding gene: 11496701

Following gene: 11496731

Centisome position: 95.96

GC content: 24.63

Gene sequence:

>468_bases
ATGAATGCTAATAAAGCTTATAAGTGCAGAATATATCCCAACACCAATCAAAAAAAATATTTTTCAAAAGTATTTGGATG
TGTAAGATTTTTGTATAACAAAATGTTAAGTGATAAGAAAGATTATTATAAAAATAATAGACAAAATCTTATTACCTATC
CAAGTAAATATWAAGAAGAATTTCCTTTTTTAAAGGAAGTTGATAGTTTGGCTCTTTGTAGCGCGTGGATCGACTTAAAT
TTTGCGTATAGTAATTTTTTTAGAGAAATTAAAAAAGGAAATAGAGTGCAAGGATTTCCTAAGTATAAAAGTAAGAAAAA
TAGGCAAACTTATAGAACTAATAATCAAAAAAACTCAATAAGAATAGAAAATGGTTATATAAAACTACCTAAAATAGGGT
TTGTAAAAGAATACAATTTATTAACATTAGAACTTTTCTCTTCTGCTTCCAGAAAAGATTATTATTAA

Upstream 100 bases:

>100_bases
AAAAATAACAAAGAATACTCCACCTATAATTTCTATGAAATTTAGGTGGAGATGAATTTGTAACGCAAGTTAAAATATGA
TTTTATAATTATAAAAAATA

Downstream 100 bases:

>100_bases
AACTGGAAAGCTTTTTGAATTAAAATTTGGGCAAAATAAGAGAATTCATTAAAGAATTATTATTAATAAAAATAATATTA
GAAAGCTAAAAATTGATTTT

Product: transposase-like protein, putative

Products: NA

Alternate protein names: Transposase For Insertion Sequence Element; Transposase-Like Protein B; Transposase OrfB Family; Transposase Family Protein; Amidase; Transposase B; Transposase-Like Protein; ISCpe2 Transposase OrfB; Transposase OrfB For Insertion Sequence Element; Transposase OrfB; Gifsy-1 Prophage GlpA; Methyl-Accepting Chemotaxis Sensory Transducer; Transposase OrfB Family Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNANKAYKCRIYPNTNQKKYFSKVFGCVRFLYNKMLSDKKDYYKNNRQNLITYPSKYXEEFPFLKEVDSLALCSAWIDLN
FAYSNFFREIKKGNRVQGFPKYKSKKNRQTYRTNNQKNSIRIENGYIKLPKIGFVKEYNLLTLELFSSASRKDYY

Sequences:

>Translated_155_residues
MNANKAYKCRIYPNTNQKKYFSKVFGCVRFLYNKMLSDKKDYYKNNRQNLITYPSKYXEEFPFLKEVDSLALCSAWIDLN
FAYSNFFREIKKGNRVQGFPKYKSKKNRQTYRTNNQKNSIRIENGYIKLPKIGFVKEYNLLTLELFSSASRKDYY
>Mature_155_residues
MNANKAYKCRIYPNTNQKKYFSKVFGCVRFLYNKMLSDKKDYYKNNRQNLITYPSKYXEEFPFLKEVDSLALCSAWIDLN
FAYSNFFREIKKGNRVQGFPKYKSKKNRQTYRTNNQKNSIRIENGYIKLPKIGFVKEYNLLTLELFSSASRKDYY

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18605; Mature: 18605

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANKAYKCRIYPNTNQKKYFSKVFGCVRFLYNKMLSDKKDYYKNNRQNLITYPSKYXEE
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCHHHHHH
FPFLKEVDSLALCSAWIDLNFAYSNFFREIKKGNRVQGFPKYKSKKNRQTYRTNNQKNSI
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCEE
RIENGYIKLPKIGFVKEYNLLTLELFSSASRKDYY
EEECCEEECCCCCCEECCCEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MNANKAYKCRIYPNTNQKKYFSKVFGCVRFLYNKMLSDKKDYYKNNRQNLITYPSKYXEE
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCHHHHHH
FPFLKEVDSLALCSAWIDLNFAYSNFFREIKKGNRVQGFPKYKSKKNRQTYRTNNQKNSI
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCEE
RIENGYIKLPKIGFVKEYNLLTLELFSSASRKDYY
EEECCEEECCCCCCEECCCEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA