Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
---|---|
Accession | NC_001852 |
Length | 29,766 |
Click here to switch to the map view.
The map label for this gene is 11496679
Identifier: 11496679
GI number: 11496679
Start: 14376
End: 14885
Strand: Reverse
Name: 11496679
Synonym: BBG18
Alternate gene names: NA
Gene position: 14885-14376 (Counterclockwise)
Preceding gene: 11496680
Following gene: 11496678
Centisome position: 50.01
GC content: 39.02
Gene sequence:
>510_bases ATGGCAGATTTCGATTTTACAAAATTATGTAAAAATTTCGTTTTAGGAGTTGAACACAAAGCATGCGTACATCAAACTGA AACCGCAATAGTTGATGTTGAATCACCCATCATCAAACCGGGAGATCCAGTTTATTCAAGTGGATCAAGTGAAATGGGAG AAGTACTGGTAAAGGCTGCAACTGCAACAGCGGGAGTTGGTCCTATTCGTGGATTTGCCTTAAAAAAGGCAGATATTGCT TTACTAGAAAGTGAAAATTACTCACCGGGCGAACTAATTCCAATAAGACGTGCCGGGGAAATAACCGTTATGTTAGATAA CACATTTGCAACTCCTAAAATTGGTGATTTTGTCTTCTTAAAGGGGGGGAAACTTGTAAAAGACGGCAAAGGGGGTGTGC AAGTTGGGAGAATCAAAGATGTTAGTCTTGATGCAAATAGCAAAGTAGTTTTGCTTGATGTTAATATTGGCCCTGAGTTT GAGTCTAATGGTAACAGAAAATTTGCATGA
Upstream 100 bases:
>100_bases CAAGCAAATGGTAAATGCAAGAAATCGATTTACAGGTCAAATTATTAACGAGACAAAATTACAAAAATACAAAGATAGAT TTGCTTTGGGGAGGGCATAA
Downstream 100 bases:
>100_bases ACGTAAAAATTTGTGAAAAAATAGGAGGTAGTTCTTGAGTAGAAGTATTTTTGCAGAAGCAAGTGGTAGTTACAGTGCAG ATATAATACAACTTGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MADFDFTKLCKNFVLGVEHKACVHQTETAIVDVESPIIKPGDPVYSSGSSEMGEVLVKAATATAGVGPIRGFALKKADIA LLESENYSPGELIPIRRAGEITVMLDNTFATPKIGDFVFLKGGKLVKDGKGGVQVGRIKDVSLDANSKVVLLDVNIGPEF ESNGNRKFA
Sequences:
>Translated_169_residues MADFDFTKLCKNFVLGVEHKACVHQTETAIVDVESPIIKPGDPVYSSGSSEMGEVLVKAATATAGVGPIRGFALKKADIA LLESENYSPGELIPIRRAGEITVMLDNTFATPKIGDFVFLKGGKLVKDGKGGVQVGRIKDVSLDANSKVVLLDVNIGPEF ESNGNRKFA >Mature_168_residues ADFDFTKLCKNFVLGVEHKACVHQTETAIVDVESPIIKPGDPVYSSGSSEMGEVLVKAATATAGVGPIRGFALKKADIAL LESENYSPGELIPIRRAGEITVMLDNTFATPKIGDFVFLKGGKLVKDGKGGVQVGRIKDVSLDANSKVVLLDVNIGPEFE SNGNRKFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17967; Mature: 17836
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFDFTKLCKNFVLGVEHKACVHQTETAIVDVESPIIKPGDPVYSSGSSEMGEVLVKAA CCCCCHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH TATAGVGPIRGFALKKADIALLESENYSPGELIPIRRAGEITVMLDNTFATPKIGDFVFL HCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEE KGGKLVKDGKGGVQVGRIKDVSLDANSKVVLLDVNIGPEFESNGNRKFA ECCEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEECC >Mature Secondary Structure ADFDFTKLCKNFVLGVEHKACVHQTETAIVDVESPIIKPGDPVYSSGSSEMGEVLVKAA CCCCHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH TATAGVGPIRGFALKKADIALLESENYSPGELIPIRRAGEITVMLDNTFATPKIGDFVFL HCCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEE KGGKLVKDGKGGVQVGRIKDVSLDANSKVVLLDVNIGPEFESNGNRKFA ECCEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA