| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800476
Identifier: 114800476
GI number: 114800476
Start: 3336875
End: 3337669
Strand: Reverse
Name: 114800476
Synonym: HNE_3156
Alternate gene names: NA
Gene position: 3337669-3336875 (Counterclockwise)
Preceding gene: 114797239
Following gene: 114799507
Centisome position: 90.09
GC content: 60.25
Gene sequence:
>795_bases GTGACAACCCCTATCTCGACTGCAGGCCAGGCTGCGCTTTCTGGCCAGGTTCTGTTCTATAAGAATCCCCAGCCCCTTTC CGCCGAAGAACATGGCGGTCTTGGGGTTAAACAGATCCCCCAGCCGTTCAGCTTCCTGCGGGAAGCCCATGCGGTCCCGG TGACCGTTACCGAGTTCGGGATTGCGGCTGCGTCGTATCCCGTCATCTTCGTGGGCGAAGACCGTACACCGGTTGCGGTC ATGGGCGTGCGCCAGGGGCAGAACCTCTATGTGAACGCTGAAGGGATGGTTCTGGAAGATCACTACATTCCGGCATTTGT CCGCCGCTACCCGTTCGTGTTCGCGGCCGATGACGGGTCTGACCGCCTGCTGCTGTGTGTCGACCGTTCGGCGCCGATGG TATCGAACCAGCCGGAAGTGGCGTTCTTCGAGAATGGCCAGCCGACCAAGTTCACCAATGATGCCATTGAATTCTGCAAG GAGTTCGAGCGTCAGCGCCGCGCGACTGTCGATTTCGTGAAAATCATCCGCGACATGGACTTGTTCGAACAGAAAACCGT GACCTTCCAGCCGCGCGACCAGCAGGGCAATGCTACCGGCCCGGTTCAGAAGATCGCTGACTATTGGGCGATCTCCGAGG AGCGCCTCGGCGCGCTTCCTCAGGATAAATTCCTTGAGCTTCGCAATAACGGGGCTCTGGGCGCCAGCTATGCCCACCTC GTTTCGCTGCTGAACTGGACGAAAGTGGTCAACCGCGCCGTCCGCACCCCGCCACCGGGCGAAGCGGCTGCGTGA
Upstream 100 bases:
>100_bases TATATTACTCGGTTTTCACTGCAATTGAGCCTGTTTCGGGAGTTGTGGCCATAGTTTATTTCCGTTACTTCTGCGCCAAA ATTCCGAGGAGCCACGCAAC
Downstream 100 bases:
>100_bases TCTGACGCCTACAATAATGGTTCTGAAACGGCCCTTCCATTGCGGAGGGCCGTTTCTTTTTGCGCGCAGGCGCGGCATCA CGAACCGGAGAGCAGGGGTT
Product: SapC family protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC Protein; SapC Superfamily; SapC-Like Protein; SapC Superfamily Protein; SapC Related Protein; Sapc Family Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTTPISTAGQAALSGQVLFYKNPQPLSAEEHGGLGVKQIPQPFSFLREAHAVPVTVTEFGIAAASYPVIFVGEDRTPVAV MGVRQGQNLYVNAEGMVLEDHYIPAFVRRYPFVFAADDGSDRLLLCVDRSAPMVSNQPEVAFFENGQPTKFTNDAIEFCK EFERQRRATVDFVKIIRDMDLFEQKTVTFQPRDQQGNATGPVQKIADYWAISEERLGALPQDKFLELRNNGALGASYAHL VSLLNWTKVVNRAVRTPPPGEAAA
Sequences:
>Translated_264_residues MTTPISTAGQAALSGQVLFYKNPQPLSAEEHGGLGVKQIPQPFSFLREAHAVPVTVTEFGIAAASYPVIFVGEDRTPVAV MGVRQGQNLYVNAEGMVLEDHYIPAFVRRYPFVFAADDGSDRLLLCVDRSAPMVSNQPEVAFFENGQPTKFTNDAIEFCK EFERQRRATVDFVKIIRDMDLFEQKTVTFQPRDQQGNATGPVQKIADYWAISEERLGALPQDKFLELRNNGALGASYAHL VSLLNWTKVVNRAVRTPPPGEAAA >Mature_263_residues TTPISTAGQAALSGQVLFYKNPQPLSAEEHGGLGVKQIPQPFSFLREAHAVPVTVTEFGIAAASYPVIFVGEDRTPVAVM GVRQGQNLYVNAEGMVLEDHYIPAFVRRYPFVFAADDGSDRLLLCVDRSAPMVSNQPEVAFFENGQPTKFTNDAIEFCKE FERQRRATVDFVKIIRDMDLFEQKTVTFQPRDQQGNATGPVQKIADYWAISEERLGALPQDKFLELRNNGALGASYAHLV SLLNWTKVVNRAVRTPPPGEAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29161; Mature: 29030
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPISTAGQAALSGQVLFYKNPQPLSAEEHGGLGVKQIPQPFSFLREAHAVPVTVTEFG CCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCEEHHHHC IAAASYPVIFVGEDRTPVAVMGVRQGQNLYVNAEGMVLEDHYIPAFVRRYPFVFAADDGS CHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCEEEECCCCHHHHHHCCEEEEECCCC DRLLLCVDRSAPMVSNQPEVAFFENGQPTKFTNDAIEFCKEFERQRRATVDFVKIIRDMD CEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEQKTVTFQPRDQQGNATGPVQKIADYWAISEERLGALPQDKFLELRNNGALGASYAHL HHHCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCCCHHHHHH VSLLNWTKVVNRAVRTPPPGEAAA HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTPISTAGQAALSGQVLFYKNPQPLSAEEHGGLGVKQIPQPFSFLREAHAVPVTVTEFG CCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCEEHHHHC IAAASYPVIFVGEDRTPVAVMGVRQGQNLYVNAEGMVLEDHYIPAFVRRYPFVFAADDGS CHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCEEEECCCCHHHHHHCCEEEEECCCC DRLLLCVDRSAPMVSNQPEVAFFENGQPTKFTNDAIEFCKEFERQRRATVDFVKIIRDMD CEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEQKTVTFQPRDQQGNATGPVQKIADYWAISEERLGALPQDKFLELRNNGALGASYAHL HHHCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCCCHHHHHH VSLLNWTKVVNRAVRTPPPGEAAA HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA