Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is ycbX [C]
Identifier: 114800266
GI number: 114800266
Start: 627770
End: 628588
Strand: Direct
Name: ycbX [C]
Synonym: HNE_0627
Alternate gene names: 114800266
Gene position: 627770-628588 (Clockwise)
Preceding gene: 114797902
Following gene: 114799445
Centisome position: 16.94
GC content: 64.47
Gene sequence:
>819_bases ATGAGCGGCGGGCTTGCCGGCCGGGTGACAAGCCTCTGGCGCCATCCGGTGAAGGGGTTTACGCCCGAACGCCTGAGCGA AGTGACCCTCACGGCCGGCGGGCATTTTCCGTGTGACCGGCTGTTTGCGATTGAAGATGGCCCGTCGGGCTTTGATCCGG CCGCCCCGGCGCATATTTCAAAGATGCGCTTCACGGTGCTCGCCCGGTTGCCCAGGATCGCCGCGATCCGCACCCGGTAT GATGAGGCGTCGGGTATCCTGACCGCCTCCCACCCTGACTTTGAAGACGTGCAGGCGCAGATGGCTGAGGCAGCGGGACG TGACGCGCTGGCCGCCTGGGTGACGCAGGTTCTGGGTGAGGACGTGCGGGGAACGCTGAAGGTTCTTCCGGCCCCGGACG GGCACCGGTTCATGGACAGCCGGTCAGGCTTTGTGTCGATCATCAATCTTGCCAGCGTGCGCGATCTGGAAACAAAGACC GGCCGGGCGATCGACCCGCTGCGCTTTCGCGGCAATATTCTGGTCGATGGCTGGCCGGCCTGGAGCGAGCATACACTGGC GGAAAAGACGGTGACGCTTGGCGGGGCAACGCTCAAGGGGATCAAACCCATCACCCGCTGCGCCGCCACCCATGTTGATC CGGCCACGGCGGAAGCCGACATGAACCTCACCGCCGCGCTCTATCAGCACTACGGCCATATGGATTGCGGCCTGTATGCC GAAGTGGTGACAGGCGGGCCTGTCTCGCCGGGCGATGTGATCGAAGCTCTGATCACGCAAGACCAATCCCGCCAGCTGGC GTCACCGGAGAAGACCTGA
Upstream 100 bases:
>100_bases CGCTCGACCGGATCATCACGGGCGACAAGCTGGGCGATGTGATCGAAGCTCTGATTACGGAAGATCAGTCCCGGCGCCTC GCCTCCCTGGAGGCAGGTGC
Downstream 100 bases:
>100_bases TGTCTATGCGCGCAGTATGGATGGCTGCCGGAATCGCCTTGCTGTCAGCCTGTGGGGCCGTGCCCGGACCGGCCTCTGGT TCCGCAGTGCTTCTGGCCGC
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; MOSC Domain Protein; Mosc Domain Containing Protein; Transcriptional Regulator; Mosc Domain; Xylene Monooxygenase Electron Transfer Component
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSGGLAGRVTSLWRHPVKGFTPERLSEVTLTAGGHFPCDRLFAIEDGPSGFDPAAPAHISKMRFTVLARLPRIAAIRTRY DEASGILTASHPDFEDVQAQMAEAAGRDALAAWVTQVLGEDVRGTLKVLPAPDGHRFMDSRSGFVSIINLASVRDLETKT GRAIDPLRFRGNILVDGWPAWSEHTLAEKTVTLGGATLKGIKPITRCAATHVDPATAEADMNLTAALYQHYGHMDCGLYA EVVTGGPVSPGDVIEALITQDQSRQLASPEKT
Sequences:
>Translated_272_residues MSGGLAGRVTSLWRHPVKGFTPERLSEVTLTAGGHFPCDRLFAIEDGPSGFDPAAPAHISKMRFTVLARLPRIAAIRTRY DEASGILTASHPDFEDVQAQMAEAAGRDALAAWVTQVLGEDVRGTLKVLPAPDGHRFMDSRSGFVSIINLASVRDLETKT GRAIDPLRFRGNILVDGWPAWSEHTLAEKTVTLGGATLKGIKPITRCAATHVDPATAEADMNLTAALYQHYGHMDCGLYA EVVTGGPVSPGDVIEALITQDQSRQLASPEKT >Mature_271_residues SGGLAGRVTSLWRHPVKGFTPERLSEVTLTAGGHFPCDRLFAIEDGPSGFDPAAPAHISKMRFTVLARLPRIAAIRTRYD EASGILTASHPDFEDVQAQMAEAAGRDALAAWVTQVLGEDVRGTLKVLPAPDGHRFMDSRSGFVSIINLASVRDLETKTG RAIDPLRFRGNILVDGWPAWSEHTLAEKTVTLGGATLKGIKPITRCAATHVDPATAEADMNLTAALYQHYGHMDCGLYAE VVTGGPVSPGDVIEALITQDQSRQLASPEKT
Specific function: Unknown
COG id: COG3217
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29178; Mature: 29047
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGLAGRVTSLWRHPVKGFTPERLSEVTLTAGGHFPCDRLFAIEDGPSGFDPAAPAHIS CCCCCHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH KMRFTVLARLPRIAAIRTRYDEASGILTASHPDFEDVQAQMAEAAGRDALAAWVTQVLGE HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC DVRGTLKVLPAPDGHRFMDSRSGFVSIINLASVRDLETKTGRAIDPLRFRGNILVDGWPA CCCCEEEEEECCCCCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCEEECCCEEEECCCC WSEHTLAEKTVTLGGATLKGIKPITRCAATHVDPATAEADMNLTAALYQHYGHMDCGLYA CCCCHHHHHEEEECCCHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHH EVVTGGPVSPGDVIEALITQDQSRQLASPEKT HHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure SGGLAGRVTSLWRHPVKGFTPERLSEVTLTAGGHFPCDRLFAIEDGPSGFDPAAPAHIS CCCCHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHH KMRFTVLARLPRIAAIRTRYDEASGILTASHPDFEDVQAQMAEAAGRDALAAWVTQVLGE HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC DVRGTLKVLPAPDGHRFMDSRSGFVSIINLASVRDLETKTGRAIDPLRFRGNILVDGWPA CCCCEEEEEECCCCCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCEEECCCEEEECCCC WSEHTLAEKTVTLGGATLKGIKPITRCAATHVDPATAEADMNLTAALYQHYGHMDCGLYA CCCCHHHHHEEEECCCHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHH EVVTGGPVSPGDVIEALITQDQSRQLASPEKT HHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA