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The map label for this gene is ychE [C]

Identifier: 114800047

GI number: 114800047

Start: 492138

End: 492788

Strand: Direct

Name: ychE [C]

Synonym: HNE_0501

Alternate gene names: 114800047

Gene position: 492138-492788 (Clockwise)

Preceding gene: 114799035

Following gene: 114799932

Centisome position: 13.28

GC content: 60.98

Gene sequence:

>651_bases
ATGTCGCCTGAACTGATCTCTCTTTTTACCGCTGCCTTTGTAACCTTCTTCGTGCTGATTGATGCGCCGGGGGTGGCGCC
GATCTTTGCTACGCTGACGGCAAAGGGCTCACCGGCCTATCGCCGCAAGATGGCGTACAAGTCCGTCTTCGTGGCGACGA
TCATCATGCTGCTGTTCGCTTTCGGCGGCGCCTGGCTGCTCGATGCGATGCACATCTCCATCGATGCCTTCCGGGCGGCC
GGCGGCGTTCTGCTGTTCCTGATCGCGCTCGACATGGTGTTCGAGAAGCGCACCGAGCGGCGGGAACAGCGCGCCGATGA
AGTGCTCGAAGAACACCGGAATGATCCGGAGCCGGAAGACGTGTCGGTGTTCCCGATGGGCATTCCGATGATTGCCGGGC
CTGGATCGATCGCCACGGCGATGTTTTACATGACGGAAGCGGAAAGCATTGCCCATCAGGGCGTCGTGCTTGCCGCGATC
GGAGCTAACCTCCTGATCACGCTGATTATCTTTCTGCTGGCAACGCCGATCGTTCGCCTGATGGGCGCGAGCGTGGCCGG
GGCGCTGACGCGGATTCTCGGGGTTATCCTGGCGGCGCTTTCGGCTCAGCTCATCCTCGATGGCATCCGCGGCGCGTTTA
ATATCGGCTGA

Upstream 100 bases:

>100_bases
TGATCTATCGCGGCTCAAGGGCATAACCCGCGAGCTTCAGGTGGCCCCGGCCGTGCGGGAGATACTTGACGCAGCGGCAC
GCAAAGCCTAGCGCCGCGCC

Downstream 100 bases:

>100_bases
GGCTTGTCAGGTGCCCTGCGGTTCGGCCCGCGGCTTTGGCAGCTTGATGTAGAGCCGGACGGTTGAGAGCATCACCCAGA
ACAGCAGCATGCCGGCAGCC

Product: MarC membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSPELISLFTAAFVTFFVLIDAPGVAPIFATLTAKGSPAYRRKMAYKSVFVATIIMLLFAFGGAWLLDAMHISIDAFRAA
GGVLLFLIALDMVFEKRTERREQRADEVLEEHRNDPEPEDVSVFPMGIPMIAGPGSIATAMFYMTEAESIAHQGVVLAAI
GANLLITLIIFLLATPIVRLMGASVAGALTRILGVILAALSAQLILDGIRGAFNIG

Sequences:

>Translated_216_residues
MSPELISLFTAAFVTFFVLIDAPGVAPIFATLTAKGSPAYRRKMAYKSVFVATIIMLLFAFGGAWLLDAMHISIDAFRAA
GGVLLFLIALDMVFEKRTERREQRADEVLEEHRNDPEPEDVSVFPMGIPMIAGPGSIATAMFYMTEAESIAHQGVVLAAI
GANLLITLIIFLLATPIVRLMGASVAGALTRILGVILAALSAQLILDGIRGAFNIG
>Mature_215_residues
SPELISLFTAAFVTFFVLIDAPGVAPIFATLTAKGSPAYRRKMAYKSVFVATIIMLLFAFGGAWLLDAMHISIDAFRAAG
GVLLFLIALDMVFEKRTERREQRADEVLEEHRNDPEPEDVSVFPMGIPMIAGPGSIATAMFYMTEAESIAHQGVVLAAIG
ANLLITLIIFLLATPIVRLMGASVAGALTRILGVILAALSAQLILDGIRGAFNIG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=201, Percent_Identity=30.8457711442786, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1789842, Length=202, Percent_Identity=29.2079207920792, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787809, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23112; Mature: 22981

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPELISLFTAAFVTFFVLIDAPGVAPIFATLTAKGSPAYRRKMAYKSVFVATIIMLLFA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGGAWLLDAMHISIDAFRAAGGVLLFLIALDMVFEKRTERREQRADEVLEEHRNDPEPED
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VSVFPMGIPMIAGPGSIATAMFYMTEAESIAHQGVVLAAIGANLLITLIIFLLATPIVRL
CEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MGASVAGALTRILGVILAALSAQLILDGIRGAFNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPELISLFTAAFVTFFVLIDAPGVAPIFATLTAKGSPAYRRKMAYKSVFVATIIMLLFA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGGAWLLDAMHISIDAFRAAGGVLLFLIALDMVFEKRTERREQRADEVLEEHRNDPEPED
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VSVFPMGIPMIAGPGSIATAMFYMTEAESIAHQGVVLAAIGANLLITLIIFLLATPIVRL
CEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MGASVAGALTRILGVILAALSAQLILDGIRGAFNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]