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The map label for this gene is 114800020

Identifier: 114800020

GI number: 114800020

Start: 2325531

End: 2326322

Strand: Direct

Name: 114800020

Synonym: HNE_2224

Alternate gene names: NA

Gene position: 2325531-2326322 (Clockwise)

Preceding gene: 114799244

Following gene: 114798010

Centisome position: 62.77

GC content: 60.86

Gene sequence:

>792_bases
ATGCGTATACTGCTGACTATCTTAGTAGGGTGCGAGCTCGCGCTGATGTCACCCGCCGCCCAGGCTCAGGAGCGCCCCTC
AGAGGCGCCGCAAGGCGTCGTGGCCATCGGCCCTGGTACGGTTCCGGAATATGATGGCTCCGGCGAGCTCCGGCTCATCC
CGTTCGCTGTGGCAAATGTCGAATGGCGCGGCACCCAGTTCCAGTTCCAGGGTTTGCGCGCGCGGGCCGATCTGGCATCG
GACACGCGCTTTTCCTTCGGCCCTGTCATCGGCGGACGGCTGTCCCGGGACGGCGCCGATGGTCAGATCGCGCTGCTGCC
CGAATTAGATACGGCGGTTGAGGCCGGCGCTTTTGCCGGTTACCGTTTCGGCGGCGACCGGTCCGGTCAGGGCGCCTTGC
GGACCGAAATAACGCTCATGCATGACGTTTCGGATGTTCATGACGGACTTCTCGCCACGGCCAGCGCCAGTTATGCCGCC
ATAAACAATCCGGTGTTCCAGCTATCCTTTGACATGCAGACAAGCTGGGCGGATGAAAACTATCTTCAGACCTACTTTGG
TGTGGATGGCGCCGCGTCCGCAATGAGCGGACTTTCTGAATTCTCCGCCAGCTCCGGCATAAAGGATGTCGGCATTGGCA
TGACCGCAGGTTACTGGCTGGATGACCAGATCGGTCTGATTGTCCGTGCCGGTACAAACTATCTCGTCGGCGATGCCGCT
GACAGCCCCATCACCGAAGAAGGCGATCGCTGGCAACCGATGATCGGCACTGCCATCGCGTACCGTTTCTAA

Upstream 100 bases:

>100_bases
CCCCCCCCTGCCTACCGGCAATCCCCGGGGCTCCCTGAAGAGGATGGTTCAAGCCGACCGCTTCAGGGAGCCTTCCTCCC
CTCAAGCACAGGAAATTTCC

Downstream 100 bases:

>100_bases
ACGCGGTTGAAAGAAATATGAGCGCCCCCTTAGCGCCGAGCAAACTGCGCTGAGGGGGATGGTCGGAATGGGCAGAATTT
TACCTGGCCCGGGCGTCATA

Product: MipA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRILLTILVGCELALMSPAAQAQERPSEAPQGVVAIGPGTVPEYDGSGELRLIPFAVANVEWRGTQFQFQGLRARADLAS
DTRFSFGPVIGGRLSRDGADGQIALLPELDTAVEAGAFAGYRFGGDRSGQGALRTEITLMHDVSDVHDGLLATASASYAA
INNPVFQLSFDMQTSWADENYLQTYFGVDGAASAMSGLSEFSASSGIKDVGIGMTAGYWLDDQIGLIVRAGTNYLVGDAA
DSPITEEGDRWQPMIGTAIAYRF

Sequences:

>Translated_263_residues
MRILLTILVGCELALMSPAAQAQERPSEAPQGVVAIGPGTVPEYDGSGELRLIPFAVANVEWRGTQFQFQGLRARADLAS
DTRFSFGPVIGGRLSRDGADGQIALLPELDTAVEAGAFAGYRFGGDRSGQGALRTEITLMHDVSDVHDGLLATASASYAA
INNPVFQLSFDMQTSWADENYLQTYFGVDGAASAMSGLSEFSASSGIKDVGIGMTAGYWLDDQIGLIVRAGTNYLVGDAA
DSPITEEGDRWQPMIGTAIAYRF
>Mature_263_residues
MRILLTILVGCELALMSPAAQAQERPSEAPQGVVAIGPGTVPEYDGSGELRLIPFAVANVEWRGTQFQFQGLRARADLAS
DTRFSFGPVIGGRLSRDGADGQIALLPELDTAVEAGAFAGYRFGGDRSGQGALRTEITLMHDVSDVHDGLLATASASYAA
INNPVFQLSFDMQTSWADENYLQTYFGVDGAASAMSGLSEFSASSGIKDVGIGMTAGYWLDDQIGLIVRAGTNYLVGDAA
DSPITEEGDRWQPMIGTAIAYRF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 27870; Mature: 27870

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLTILVGCELALMSPAAQAQERPSEAPQGVVAIGPGTVPEYDGSGELRLIPFAVANV
CEEEEEEHHHCHHEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECE
EWRGTQFQFQGLRARADLASDTRFSFGPVIGGRLSRDGADGQIALLPELDTAVEAGAFAG
EECCCEEEEECCEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCHHHHHHCCCEE
YRFGGDRSGQGALRTEITLMHDVSDVHDGLLATASASYAAINNPVFQLSFDMQTSWADEN
EECCCCCCCCCCEEEEEEEEECHHHHHCCCEEECCCCEEEECCCEEEEEECCCCCCCCCH
YLQTYFGVDGAASAMSGLSEFSASSGIKDVGIGMTAGYWLDDQIGLIVRAGTNYLVGDAA
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCEEEECCCCEEEECCC
DSPITEEGDRWQPMIGTAIAYRF
CCCCCCCCCCCCCHHHHEEEECC
>Mature Secondary Structure
MRILLTILVGCELALMSPAAQAQERPSEAPQGVVAIGPGTVPEYDGSGELRLIPFAVANV
CEEEEEEHHHCHHEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECE
EWRGTQFQFQGLRARADLASDTRFSFGPVIGGRLSRDGADGQIALLPELDTAVEAGAFAG
EECCCEEEEECCEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCHHHHHHCCCEE
YRFGGDRSGQGALRTEITLMHDVSDVHDGLLATASASYAAINNPVFQLSFDMQTSWADEN
EECCCCCCCCCCEEEEEEEEECHHHHHCCCEEECCCCEEEECCCEEEEEECCCCCCCCCH
YLQTYFGVDGAASAMSGLSEFSASSGIKDVGIGMTAGYWLDDQIGLIVRAGTNYLVGDAA
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCEEEECCCCEEEECCC
DSPITEEGDRWQPMIGTAIAYRF
CCCCCCCCCCCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]