| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799996
Identifier: 114799996
GI number: 114799996
Start: 1097096
End: 1098025
Strand: Reverse
Name: 114799996
Synonym: HNE_1088
Alternate gene names: NA
Gene position: 1098025-1097096 (Counterclockwise)
Preceding gene: 114799326
Following gene: 114798224
Centisome position: 29.64
GC content: 61.61
Gene sequence:
>930_bases ATGCGAAGGCCTCCAGTGGCCATTCCCAAAAGAAAAGGCCTCCCCATGAAACTGTTACGCGCCGCGACGCTGACCGTGTC CGATCTCGAGCGCTCCATCGGCAACTACACGAAATACTTCGACTATGCCGTTGTTGAGCGGGGCGATGTGCCCGCAGACC TCGCCGCCAGCTGGGCAACGCCCGCCTCGGCAGGTCTTCCCTATGCCGTGATGCAGCCTTCCTCCGGCGCAGAGGTCTTC ATCCGCTTCGTCCAGCAGCCGGCCGTCCCCGGCTACCAGGCGCTTCGTTCCTATGGCTGGAACGCCATCGAAATCTGCGT TCAGGACGTGATGGAAGCCAACGCCCGCATGGAAAACTCCCCCTTCGAGATCATCGGCCCGCCGCGCGAGATCGAAGGCC TCGACGCCATCTTCCCCATGCAAGTGAAAGGCCCGGACGAGGAAATCGTCTACCTCACCCAGATCCGCGACGACCTGCCC GCTTTCGATCTGCCGCGCGCGGCCTCCGTCATCGACAAACTTTTCATCCTCGTTCTCGGCTGCAGCGACATGAAAGCCTC GCTGGACTGGATGGTCCGCCATTGCGGCCTCGCCGTCGGCCGCGAAGAAATGGAAATCGTCTACACAATGATCGCCAAGG CTTACGGTACGCCGATGGAGGAGCTCCACAAAATCTCCACCATGATCCATGGCCGAGACGTCTTCCTCGAGCTTGACCAG TATCCTGCCGCCGCCATCCAGCGTCCGCATAATGACGGCATGCTCGTGCCCGGCTGTGCCATCGGCACCCTCTGGCATCC GGAGTTTGACAGCCTGCCCGGCCCCTGGATCACACCGCCCACCCGCCGCGAAGGCCCCATATACAAAGGCAAACGCGCCG GAACGATCAAGGATCTTGACGGCGCCCTGATCGAGATTGTCGAAGCATGA
Upstream 100 bases:
>100_bases ATAAAGCGCTGGCGATCCTTCACCCGCGCAAAAACAATCATGTACGCTGCCATCTGCAACCTTTCAGCTTTGCCTCAGAG ATTCAAATGATATATCTTTT
Downstream 100 bases:
>100_bases AACTCTACACCCTGAAAACTGAGATCGACGCTGTTCCGGTTGCGGATGATTTTATCGCCATTGAGGCGCCGCGCCCGGAC TGCCCGGACGGCGGCATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRRPPVAIPKRKGLPMKLLRAATLTVSDLERSIGNYTKYFDYAVVERGDVPADLAASWATPASAGLPYAVMQPSSGAEVF IRFVQQPAVPGYQALRSYGWNAIEICVQDVMEANARMENSPFEIIGPPREIEGLDAIFPMQVKGPDEEIVYLTQIRDDLP AFDLPRAASVIDKLFILVLGCSDMKASLDWMVRHCGLAVGREEMEIVYTMIAKAYGTPMEELHKISTMIHGRDVFLELDQ YPAAAIQRPHNDGMLVPGCAIGTLWHPEFDSLPGPWITPPTRREGPIYKGKRAGTIKDLDGALIEIVEA
Sequences:
>Translated_309_residues MRRPPVAIPKRKGLPMKLLRAATLTVSDLERSIGNYTKYFDYAVVERGDVPADLAASWATPASAGLPYAVMQPSSGAEVF IRFVQQPAVPGYQALRSYGWNAIEICVQDVMEANARMENSPFEIIGPPREIEGLDAIFPMQVKGPDEEIVYLTQIRDDLP AFDLPRAASVIDKLFILVLGCSDMKASLDWMVRHCGLAVGREEMEIVYTMIAKAYGTPMEELHKISTMIHGRDVFLELDQ YPAAAIQRPHNDGMLVPGCAIGTLWHPEFDSLPGPWITPPTRREGPIYKGKRAGTIKDLDGALIEIVEA >Mature_309_residues MRRPPVAIPKRKGLPMKLLRAATLTVSDLERSIGNYTKYFDYAVVERGDVPADLAASWATPASAGLPYAVMQPSSGAEVF IRFVQQPAVPGYQALRSYGWNAIEICVQDVMEANARMENSPFEIIGPPREIEGLDAIFPMQVKGPDEEIVYLTQIRDDLP AFDLPRAASVIDKLFILVLGCSDMKASLDWMVRHCGLAVGREEMEIVYTMIAKAYGTPMEELHKISTMIHGRDVFLELDQ YPAAAIQRPHNDGMLVPGCAIGTLWHPEFDSLPGPWITPPTRREGPIYKGKRAGTIKDLDGALIEIVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34181; Mature: 34181
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPPVAIPKRKGLPMKLLRAATLTVSDLERSIGNYTKYFDYAVVERGDVPADLAASWAT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCC PASAGLPYAVMQPSSGAEVFIRFVQQPAVPGYQALRSYGWNAIEICVQDVMEANARMENS CCCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC PFEIIGPPREIEGLDAIFPMQVKGPDEEIVYLTQIRDDLPAFDLPRAASVIDKLFILVLG CEEEECCCHHHCCCCCEEEEEECCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHC CSDMKASLDWMVRHCGLAVGREEMEIVYTMIAKAYGTPMEELHKISTMIHGRDVFLELDQ CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECC YPAAAIQRPHNDGMLVPGCAIGTLWHPEFDSLPGPWITPPTRREGPIYKGKRAGTIKDLD CCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC GALIEIVEA HHHHHHCCC >Mature Secondary Structure MRRPPVAIPKRKGLPMKLLRAATLTVSDLERSIGNYTKYFDYAVVERGDVPADLAASWAT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCC PASAGLPYAVMQPSSGAEVFIRFVQQPAVPGYQALRSYGWNAIEICVQDVMEANARMENS CCCCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC PFEIIGPPREIEGLDAIFPMQVKGPDEEIVYLTQIRDDLPAFDLPRAASVIDKLFILVLG CEEEECCCHHHCCCCCEEEEEECCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHC CSDMKASLDWMVRHCGLAVGREEMEIVYTMIAKAYGTPMEELHKISTMIHGRDVFLELDQ CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECC YPAAAIQRPHNDGMLVPGCAIGTLWHPEFDSLPGPWITPPTRREGPIYKGKRAGTIKDLD CCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC GALIEIVEA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA