Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799884
Identifier: 114799884
GI number: 114799884
Start: 187861
End: 188538
Strand: Direct
Name: 114799884
Synonym: HNE_0203
Alternate gene names: NA
Gene position: 187861-188538 (Clockwise)
Preceding gene: 114797270
Following gene: 114798835
Centisome position: 5.07
GC content: 62.54
Gene sequence:
>678_bases ATGGAAGCAGCCCGTCACAATGATCCGATTTCGCTCTGGGCGCCCCGGCGACAGCTGACGCTGGCGCAGGCGCGGCGGCG GTCGGAGCGGGTGAAGTATCTGCGCTACGCCCTGGTGGGGGCCGCAGCGGTCTCCATCGGGCTTTTTCTCGGTTACATTG TTCGCAGTGCCATTGGCCAGGAATCGCGCCCGCCTCCGGTGGATGACAGCCAGGCGGTCACGATGGTCAATCCACGCTTT ACCGGGCGCGATGCGGCGGGCCAGATTTTCACGATTACGGCCGACACGGCCAAGCGCCGTCGGACCCGTGACGGGGCCGT TGACCTGACCGGGCCGATCCTGCGCGATTCCAAGGGCACCGAAGTTCAGGCGCCATCGGGCTTTTATGACCGGGATCTCG GAATTCTCGAGCTTTACGAGGATGTCCGGATTTCCGACGCGGCGGGTTATATGTTCAATTCGCAGGGCGCCCGCGTGCAT GTCGCCGAGGACCGCGTCGAGGGGCTTTCGCCGCTTGAAGGGCAGGGGCCTCTTGGCGACATCAAGGCAGACTCGTATGA AATCCTTGATGGCGGCGACCGCATCGTCTTCAAGGGCAATGTCCAGACGGTGATCTATCCAAGCAATTCCGGGCAACCGG CAGGAACGCGTGAAGGTGATGAAGATGGCACTCCTTAA
Upstream 100 bases:
>100_bases CAAAGCCTGTCCGATACCTGCCTTCTCGTGCTTTCGCAGGCGCAGCTTCACGGTTAAGACTGCTGGTTGATCGCAGTTTA TCCGGATTCTCCCCGCCTCC
Downstream 100 bases:
>100_bases GGCAGCAGGCGCTGGTCTTGTCCTTGGCCTCCTGATGGGCGCGCCTGCCTTTGCGCAAATCTCGTCGGATGGCGGCCCGA TCTATATCAATTCGGAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MEAARHNDPISLWAPRRQLTLAQARRRSERVKYLRYALVGAAAVSIGLFLGYIVRSAIGQESRPPPVDDSQAVTMVNPRF TGRDAAGQIFTITADTAKRRRTRDGAVDLTGPILRDSKGTEVQAPSGFYDRDLGILELYEDVRISDAAGYMFNSQGARVH VAEDRVEGLSPLEGQGPLGDIKADSYEILDGGDRIVFKGNVQTVIYPSNSGQPAGTREGDEDGTP
Sequences:
>Translated_225_residues MEAARHNDPISLWAPRRQLTLAQARRRSERVKYLRYALVGAAAVSIGLFLGYIVRSAIGQESRPPPVDDSQAVTMVNPRF TGRDAAGQIFTITADTAKRRRTRDGAVDLTGPILRDSKGTEVQAPSGFYDRDLGILELYEDVRISDAAGYMFNSQGARVH VAEDRVEGLSPLEGQGPLGDIKADSYEILDGGDRIVFKGNVQTVIYPSNSGQPAGTREGDEDGTP >Mature_225_residues MEAARHNDPISLWAPRRQLTLAQARRRSERVKYLRYALVGAAAVSIGLFLGYIVRSAIGQESRPPPVDDSQAVTMVNPRF TGRDAAGQIFTITADTAKRRRTRDGAVDLTGPILRDSKGTEVQAPSGFYDRDLGILELYEDVRISDAAGYMFNSQGARVH VAEDRVEGLSPLEGQGPLGDIKADSYEILDGGDRIVFKGNVQTVIYPSNSGQPAGTREGDEDGTP
Specific function: Unknown
COG id: COG5375
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24449; Mature: 24449
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAARHNDPISLWAPRRQLTLAQARRRSERVKYLRYALVGAAAVSIGLFLGYIVRSAIGQ CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ESRPPPVDDSQAVTMVNPRFTGRDAAGQIFTITADTAKRRRTRDGAVDLTGPILRDSKGT CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHCCCCCEECCCCEEECCCCC EVQAPSGFYDRDLGILELYEDVRISDAAGYMFNSQGARVHVAEDRVEGLSPLEGQGPLGD EEECCCCCCCCCCCHHHHHHHHEECCCCCEEECCCCCEEEEECHHHCCCCCCCCCCCCCC IKADSYEILDGGDRIVFKGNVQTVIYPSNSGQPAGTREGDEDGTP CCCCCEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEAARHNDPISLWAPRRQLTLAQARRRSERVKYLRYALVGAAAVSIGLFLGYIVRSAIGQ CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ESRPPPVDDSQAVTMVNPRFTGRDAAGQIFTITADTAKRRRTRDGAVDLTGPILRDSKGT CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHCCCCCEECCCCEEECCCCC EVQAPSGFYDRDLGILELYEDVRISDAAGYMFNSQGARVHVAEDRVEGLSPLEGQGPLGD EEECCCCCCCCCCCHHHHHHHHEECCCCCEEECCCCCEEEEECHHHCCCCCCCCCCCCCC IKADSYEILDGGDRIVFKGNVQTVIYPSNSGQPAGTREGDEDGTP CCCCCEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA