Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799870
Identifier: 114799870
GI number: 114799870
Start: 579106
End: 581736
Strand: Direct
Name: 114799870
Synonym: HNE_0582
Alternate gene names: NA
Gene position: 579106-581736 (Clockwise)
Preceding gene: 114798085
Following gene: 114799001
Centisome position: 15.63
GC content: 68.07
Gene sequence:
>2631_bases GTGCTGATTGAGCGGGAACGGGAACTTGACCAGCTGACCGCGCTGATTGCCCTGGCCGGGCGGGGGCAGGGCACGGTCGC GCTGGTGTGCGGGGAAGCGGGCATTGGCAAGACATCGCTGATCCGCGGCCTGTTCGGCAGGGTGCCGCGCGGTTGGCGCG CCGCGACCGGTGGCTGCGACGCGCTTTATACGCCCCGGCCGCTCGGCCCGCTGCGGGATATGGCGGGCATATTGGGGCCG GAGGTGCGCGCCCTTCTGGAGAAGGGAGACCGCCAGCAGCTGTTTGCCGCCGTTCTGGACGCGATCAGCCGCGCCAACAG CCCCCTCCTGATGATCTGGGAGGACGTGCACTGGGCCGATCACGCCACGCTCGACCTGCTGCGCTATCTGGGGCGGCGCA TTTCGTTTCTGCCGCTGCTGCTGGTGCTGACCTACCGGGATGATGAAATTGGCGAGCAGCATCCTCTGGCCCGCGTGCTG GACGAGTTGCCGGGACCGGCGCGCGAGCTTGTGCCGCTGCGGCGGCTGTCTCCCAAGGCGGTCAGCGCGCTGGCACGCAA GGCAAGCCTGCCGGGCGATTGGCTGTATCAGAAAACCGCCGGTAACCCCTTTCAGGTGACCGAGATGCTGGCCGCCGGGC AGGGCAGCGAGGAGACCCTGCCTGCCTCGATCCGGGAGGCGGTCACCGTCCGCCAGGGCCGGCTTGCCGGGGGCGCGCGC GAGCTTCTGGAGCTTATCAGTGTCATCCCTGCTGCGGTGCCTGCGGGGCTCGTCATGGAGCTGGGCGGCGAGGAAGCGGT CGCGGTGGCCGATGACCTGACCGCCAGCGGTATTCTTCAGGTATCGACGGCGGGCGACCTGCGGTTCCGGCACGAGATCG CGCGGGTCGCCACGTTGGAGCGGGTTCCTGCCAAGGTGCGCCGCGCCCATCATGCCCGCATTCTGGAGGCGCTGCGCGCA CTTGGGCCCGACGCGCCGCTTGACCAGATGGTGCATCACGCGGCCGGGGCGCTCGATGGCGCGGCGGTTCTGGCCATCGC GCCGGAAGCGGCAGACCGCGCAGCCGCCAGCGGCGCGCACCGGGAAGCGGCGGGTCATCTGGGTACGGCGCTTCGCTTTG TGGAGGAGGCAGAGGCGGAAACCGCCGCCCTTCTGCATGAGCGCTGGGCGTATGAGAGCGCGCTGGCGGCGCGGATTGAT GACGAGGTGCTCGATGCCCGCCGCCATGCGATCACGCTCTGGCGGGTGCTGGGGCGTCAGGACAAGGTGGGCGAGAATCT CCGCTGGCTCTCGCGTATGCACTGGTATCGCGGCGAAGCGCCCGAGGCGGCCCGGTTGTCGGATCAGGCGATCAGCGTTC TGGAAAGCATTCCGCCCTCGGCCGAGCAGGCGATGGCCTATTCGCTGCGCTCGCAGCTCCACATGCTGAATGACCAGATG GAGGCGGCGGTCTATTGGGGAGAGCGGGCGCTGGCGCTGGAGGCCGATTTTCCGCGGGCGGACCTGCGCGCCCATGCGCT CAACAATATCGGGACCGCGCTGGTCTTCCGGGGGCGCAGCGAAGGCGTCGCGATGCTGGAAGAAAGCCTGGAGATTTCGC TGGCCGGCAACCTGCATGAACATGCCGCGCGCGCCTATACCAACCTTGCCGAATATGCGGTGGAGTTCCGCCAGTTTGAT CTGGCCGAGAAGACCATCGCCAACGGCATTGCCTTTGACATCGACCACGACCTGGACGCCTGGACCTTCTATCTTTCGGG CCGGCTTGCCCTGTTGCGGATGGAGCAGGGGCGCCTGAAAGATGCCGTGACGATGGCGCGCGCGGTGACCGAGCGCGAGA AGCTGACACTGGTTGTGCGCCTGCCGGCCTTGCTCGTTCAGGCGCGCGCCGCGATGCGTCTGGGCGCGCCGGAAGCCCCG CGCCTGATGGAGCAGGCCTACGCCGATGCGATGGCCACGGACGAGTTGCAGCATATCGTGCCCGCACGCCTCACCCTGAT CGAGCATGCCTGGCTGTCAGGCAACCGGGCGCTGGCGGGCGAGCATCTCGATGCCCTTCTTGCCTTGGCCGATGGTGACC GCCACCCCTGGAACATCGGGGAGCGCGCCGTATGGGCCCGAAGGATGGGGCGGGAGATACCGCTTCTGGATATGGTCGCT CTGCCGGAGCCTCTGAGGCTTGAGCTTGCCGGAGAGATCGAGCCGGCTGCGCAGGCCTGGCGCGCGCTGGGTATGCCCTA TGCCGCCGCGCTGGTCTGTGTGCAGAGTGATGATGTCGACCTGTTGAGCCAGGCGGTGCATGAGTTGCAGGCGATGGGCG CTGAGGCCGCCGCCGCCTATGCCCGCCGCCGTGCGTCAGAGCTTGGCGTCACACGCCGCCTTCCACGCCCGCGCCGAGGC ACCTACAGCGCGGCGCGTGAACACCCTCTGGGGCTGACCCGCCGCGAACAGGATGTGCTGCGCCTCATCGTCAAGGGCTG TTCAAACCGCGAGATTTCCGAAGAACTCGGCCGCTCGCCGCGCACGGTGGAGCATCACGTCTCGGCCGTGCTTTCAAAAC TCAACGCGCAGAACCGGATGGCCGTCATGCTGCGTGTGCAGAACGATCCGTGGCTGCTGGGTACCCCCTGA
Upstream 100 bases:
>100_bases GGCCTACCCATTTTTCAGCTTTTCTGCGCTGCGCCAGCCGTTAAGCTGACCTACCTTGCGGGCCGGGAAGAGGCCGGCAA GGCTTGGGGGAGCAGTTTGT
Downstream 100 bases:
>100_bases TCATTTCGGGCAGATGATCGGCGCCGGTGTTCCGGCAAAGCGGGCCTGCGTCCATTTTATCAGCACCGGCACGGTGGGCG CGTCTGGCCCGGTGATGGAC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; ATPase-Like Protein; Transcriptional Activator Domain-Containing Protein; Regulatory Protein; Serine/Threonine Protein Kinase; Regulatory Protein LuxR; LuxR-Family Transcriptional Regulator; Transcriptional Regulator ATPase Winged Helix Family; Bacterial Transcriptional Activator Domain Family; Winged Helix Family Transcriptional Regulator ATPase; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Activator Domain Protein; PAS Fold Family; ATPase Winged Helix Family Transcriptional Regulator; Multi-Sensor Signal Transduction Multi-Kinase; Large Transcriptional Regulator; DnrI/RedD/AfsR Family Transcriptional Regulator; Transcriptional Regulatory; Protein Kinase; LuxR Family Regulator
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MLIERERELDQLTALIALAGRGQGTVALVCGEAGIGKTSLIRGLFGRVPRGWRAATGGCDALYTPRPLGPLRDMAGILGP EVRALLEKGDRQQLFAAVLDAISRANSPLLMIWEDVHWADHATLDLLRYLGRRISFLPLLLVLTYRDDEIGEQHPLARVL DELPGPARELVPLRRLSPKAVSALARKASLPGDWLYQKTAGNPFQVTEMLAAGQGSEETLPASIREAVTVRQGRLAGGAR ELLELISVIPAAVPAGLVMELGGEEAVAVADDLTASGILQVSTAGDLRFRHEIARVATLERVPAKVRRAHHARILEALRA LGPDAPLDQMVHHAAGALDGAAVLAIAPEAADRAAASGAHREAAGHLGTALRFVEEAEAETAALLHERWAYESALAARID DEVLDARRHAITLWRVLGRQDKVGENLRWLSRMHWYRGEAPEAARLSDQAISVLESIPPSAEQAMAYSLRSQLHMLNDQM EAAVYWGERALALEADFPRADLRAHALNNIGTALVFRGRSEGVAMLEESLEISLAGNLHEHAARAYTNLAEYAVEFRQFD LAEKTIANGIAFDIDHDLDAWTFYLSGRLALLRMEQGRLKDAVTMARAVTEREKLTLVVRLPALLVQARAAMRLGAPEAP RLMEQAYADAMATDELQHIVPARLTLIEHAWLSGNRALAGEHLDALLALADGDRHPWNIGERAVWARRMGREIPLLDMVA LPEPLRLELAGEIEPAAQAWRALGMPYAAALVCVQSDDVDLLSQAVHELQAMGAEAAAAYARRRASELGVTRRLPRPRRG TYSAAREHPLGLTRREQDVLRLIVKGCSNREISEELGRSPRTVEHHVSAVLSKLNAQNRMAVMLRVQNDPWLLGTP
Sequences:
>Translated_876_residues MLIERERELDQLTALIALAGRGQGTVALVCGEAGIGKTSLIRGLFGRVPRGWRAATGGCDALYTPRPLGPLRDMAGILGP EVRALLEKGDRQQLFAAVLDAISRANSPLLMIWEDVHWADHATLDLLRYLGRRISFLPLLLVLTYRDDEIGEQHPLARVL DELPGPARELVPLRRLSPKAVSALARKASLPGDWLYQKTAGNPFQVTEMLAAGQGSEETLPASIREAVTVRQGRLAGGAR ELLELISVIPAAVPAGLVMELGGEEAVAVADDLTASGILQVSTAGDLRFRHEIARVATLERVPAKVRRAHHARILEALRA LGPDAPLDQMVHHAAGALDGAAVLAIAPEAADRAAASGAHREAAGHLGTALRFVEEAEAETAALLHERWAYESALAARID DEVLDARRHAITLWRVLGRQDKVGENLRWLSRMHWYRGEAPEAARLSDQAISVLESIPPSAEQAMAYSLRSQLHMLNDQM EAAVYWGERALALEADFPRADLRAHALNNIGTALVFRGRSEGVAMLEESLEISLAGNLHEHAARAYTNLAEYAVEFRQFD LAEKTIANGIAFDIDHDLDAWTFYLSGRLALLRMEQGRLKDAVTMARAVTEREKLTLVVRLPALLVQARAAMRLGAPEAP RLMEQAYADAMATDELQHIVPARLTLIEHAWLSGNRALAGEHLDALLALADGDRHPWNIGERAVWARRMGREIPLLDMVA LPEPLRLELAGEIEPAAQAWRALGMPYAAALVCVQSDDVDLLSQAVHELQAMGAEAAAAYARRRASELGVTRRLPRPRRG TYSAAREHPLGLTRREQDVLRLIVKGCSNREISEELGRSPRTVEHHVSAVLSKLNAQNRMAVMLRVQNDPWLLGTP >Mature_876_residues MLIERERELDQLTALIALAGRGQGTVALVCGEAGIGKTSLIRGLFGRVPRGWRAATGGCDALYTPRPLGPLRDMAGILGP EVRALLEKGDRQQLFAAVLDAISRANSPLLMIWEDVHWADHATLDLLRYLGRRISFLPLLLVLTYRDDEIGEQHPLARVL DELPGPARELVPLRRLSPKAVSALARKASLPGDWLYQKTAGNPFQVTEMLAAGQGSEETLPASIREAVTVRQGRLAGGAR ELLELISVIPAAVPAGLVMELGGEEAVAVADDLTASGILQVSTAGDLRFRHEIARVATLERVPAKVRRAHHARILEALRA LGPDAPLDQMVHHAAGALDGAAVLAIAPEAADRAAASGAHREAAGHLGTALRFVEEAEAETAALLHERWAYESALAARID DEVLDARRHAITLWRVLGRQDKVGENLRWLSRMHWYRGEAPEAARLSDQAISVLESIPPSAEQAMAYSLRSQLHMLNDQM EAAVYWGERALALEADFPRADLRAHALNNIGTALVFRGRSEGVAMLEESLEISLAGNLHEHAARAYTNLAEYAVEFRQFD LAEKTIANGIAFDIDHDLDAWTFYLSGRLALLRMEQGRLKDAVTMARAVTEREKLTLVVRLPALLVQARAAMRLGAPEAP RLMEQAYADAMATDELQHIVPARLTLIEHAWLSGNRALAGEHLDALLALADGDRHPWNIGERAVWARRMGREIPLLDMVA LPEPLRLELAGEIEPAAQAWRALGMPYAAALVCVQSDDVDLLSQAVHELQAMGAEAAAAYARRRASELGVTRRLPRPRRG TYSAAREHPLGLTRREQDVLRLIVKGCSNREISEELGRSPRTVEHHVSAVLSKLNAQNRMAVMLRVQNDPWLLGTP
Specific function: Unknown
COG id: COG3899
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95816; Mature: 95816
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIERERELDQLTALIALAGRGQGTVALVCGEAGIGKTSLIRGLFGRVPRGWRAATGGCD CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC ALYTPRPLGPLRDMAGILGPEVRALLEKGDRQQLFAAVLDAISRANSPLLMIWEDVHWAD CCCCCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH HATLDLLRYLGRRISFLPLLLVLTYRDDEIGEQHPLARVLDELPGPARELVPLRRLSPKA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCHHH VSALARKASLPGDWLYQKTAGNPFQVTEMLAAGQGSEETLPASIREAVTVRQGRLAGGAR HHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHH ELLELISVIPAAVPAGLVMELGGEEAVAVADDLTASGILQVSTAGDLRFRHEIARVATLE HHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHH RVPAKVRRAHHARILEALRALGPDAPLDQMVHHAAGALDGAAVLAIAPEAADRAAASGAH HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCH REAAGHLGTALRFVEEAEAETAALLHERWAYESALAARIDDEVLDARRHAITLWRVLGRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC DKVGENLRWLSRMHWYRGEAPEAARLSDQAISVLESIPPSAEQAMAYSLRSQLHMLNDQM CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EAAVYWGERALALEADFPRADLRAHALNNIGTALVFRGRSEGVAMLEESLEISLAGNLHE HHHHEECCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHEEEECCCHHH HAARAYTNLAEYAVEFRQFDLAEKTIANGIAFDIDHDLDAWTFYLSGRLALLRMEQGRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEHHCCCCEEEEEEHHHHHH DAVTMARAVTEREKLTLVVRLPALLVQARAAMRLGAPEAPRLMEQAYADAMATDELQHIV HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH PARLTLIEHAWLSGNRALAGEHLDALLALADGDRHPWNIGERAVWARRMGREIPLLDMVA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH LPEPLRLELAGEIEPAAQAWRALGMPYAAALVCVQSDDVDLLSQAVHELQAMGAEAAAAY CCCCCEEEECCCCCHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHHHHCHHHHHHH ARRRASELGVTRRLPRPRRGTYSAAREHPLGLTRREQDVLRLIVKGCSNREISEELGRSP HHHHHHHCCHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCC RTVEHHVSAVLSKLNAQNRMAVMLRVQNDPWLLGTP CHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCC >Mature Secondary Structure MLIERERELDQLTALIALAGRGQGTVALVCGEAGIGKTSLIRGLFGRVPRGWRAATGGCD CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC ALYTPRPLGPLRDMAGILGPEVRALLEKGDRQQLFAAVLDAISRANSPLLMIWEDVHWAD CCCCCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH HATLDLLRYLGRRISFLPLLLVLTYRDDEIGEQHPLARVLDELPGPARELVPLRRLSPKA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCHHH VSALARKASLPGDWLYQKTAGNPFQVTEMLAAGQGSEETLPASIREAVTVRQGRLAGGAR HHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHH ELLELISVIPAAVPAGLVMELGGEEAVAVADDLTASGILQVSTAGDLRFRHEIARVATLE HHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHH RVPAKVRRAHHARILEALRALGPDAPLDQMVHHAAGALDGAAVLAIAPEAADRAAASGAH HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCH REAAGHLGTALRFVEEAEAETAALLHERWAYESALAARIDDEVLDARRHAITLWRVLGRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC DKVGENLRWLSRMHWYRGEAPEAARLSDQAISVLESIPPSAEQAMAYSLRSQLHMLNDQM CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EAAVYWGERALALEADFPRADLRAHALNNIGTALVFRGRSEGVAMLEESLEISLAGNLHE HHHHEECCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHEEEECCCHHH HAARAYTNLAEYAVEFRQFDLAEKTIANGIAFDIDHDLDAWTFYLSGRLALLRMEQGRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEHHCCCCEEEEEEHHHHHH DAVTMARAVTEREKLTLVVRLPALLVQARAAMRLGAPEAPRLMEQAYADAMATDELQHIV HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH PARLTLIEHAWLSGNRALAGEHLDALLALADGDRHPWNIGERAVWARRMGREIPLLDMVA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH LPEPLRLELAGEIEPAAQAWRALGMPYAAALVCVQSDDVDLLSQAVHELQAMGAEAAAAY CCCCCEEEECCCCCHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHHHHCHHHHHHH ARRRASELGVTRRLPRPRRGTYSAAREHPLGLTRREQDVLRLIVKGCSNREISEELGRSP HHHHHHHCCHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCC RTVEHHVSAVLSKLNAQNRMAVMLRVQNDPWLLGTP CHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA