| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799835
Identifier: 114799835
GI number: 114799835
Start: 841876
End: 842451
Strand: Reverse
Name: 114799835
Synonym: HNE_0819
Alternate gene names: NA
Gene position: 842451-841876 (Counterclockwise)
Preceding gene: 114799517
Following gene: 114797830
Centisome position: 22.74
GC content: 65.1
Gene sequence:
>576_bases ATGCGCGTGTCCCTTATCTCTGCCGCCGGTGTTGCCGCGCTGATCCTGGCGGCTTGCGCCCCGGCAGCGGAAGCGCCGGC ACCTGACGCGATCGCAGCGCCTGCCGCCGAAGCCATCCAAGATGATCACGCCGGCATGCACGGCGATGATGCAGGCGCCG AAGCTGATGCGCCGGTAGATCGCGGTGTCATCGCAGGCTCACTGGCGCTGCTGGAGGGGAGCATTCTCGTGCCGCCCGCA GGACGGGATGTCACGGCCGGCTTTGGTACATTCGCTGCGGGCGCGCGCGCCGTCACGATTGTCGGCGCCGAAGCCTCGTT TGCCCAGGCGGTTGAGCTGCACACGCACGAAATGAGCGATGACGGCAAGATGGCGATGCGCAAGGTGGACGCGTTTCCGG TGCCCGCCAATGGAGACCGCGCGCTCAAACGCGGCGGCGATCACATGATGTTTTTCGGGGTTCAGCCCGACGCCCTGACG CCTGGCGCAGCGGTTACGGTTTTGGTCCGCGCACAATTTGAAGATGGAACGACCGAAGAGATCGAAGTGCCGTTTACGGT TGCAGCGCAGGAATAG
Upstream 100 bases:
>100_bases GCTACTGAGGCAGGCTGACGCGCGGCAACAATCTGAGTTGCCCGCGGCGGCGAGGTAGAGTTCACTCCGGTCAAATTTAA GATTTGAACGGAGCTGTCCC
Downstream 100 bases:
>100_bases TCAGCGCCGCCTTGCCAGAAACAGGTATTCGCGGTTTCCGTCCCCGCCCTCTATCGGGCTGGGGATGGGGGCCTGCGCAA GCCAGCCGCAGCCGGACAGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRVSLISAAGVAALILAACAPAAEAPAPDAIAAPAAEAIQDDHAGMHGDDAGAEADAPVDRGVIAGSLALLEGSILVPPA GRDVTAGFGTFAAGARAVTIVGAEASFAQAVELHTHEMSDDGKMAMRKVDAFPVPANGDRALKRGGDHMMFFGVQPDALT PGAAVTVLVRAQFEDGTTEEIEVPFTVAAQE
Sequences:
>Translated_191_residues MRVSLISAAGVAALILAACAPAAEAPAPDAIAAPAAEAIQDDHAGMHGDDAGAEADAPVDRGVIAGSLALLEGSILVPPA GRDVTAGFGTFAAGARAVTIVGAEASFAQAVELHTHEMSDDGKMAMRKVDAFPVPANGDRALKRGGDHMMFFGVQPDALT PGAAVTVLVRAQFEDGTTEEIEVPFTVAAQE >Mature_191_residues MRVSLISAAGVAALILAACAPAAEAPAPDAIAAPAAEAIQDDHAGMHGDDAGAEADAPVDRGVIAGSLALLEGSILVPPA GRDVTAGFGTFAAGARAVTIVGAEASFAQAVELHTHEMSDDGKMAMRKVDAFPVPANGDRALKRGGDHMMFFGVQPDALT PGAAVTVLVRAQFEDGTTEEIEVPFTVAAQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19212; Mature: 19212
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSLISAAGVAALILAACAPAAEAPAPDAIAAPAAEAIQDDHAGMHGDDAGAEADAPVD CEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCCC RGVIAGSLALLEGSILVPPAGRDVTAGFGTFAAGARAVTIVGAEASFAQAVELHTHEMSD CCHHHHEHEEECCCEEECCCCCCCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHCCCC DGKMAMRKVDAFPVPANGDRALKRGGDHMMFFGVQPDALTPGAAVTVLVRAQFEDGTTEE CHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCE IEVPFTVAAQE EECCEEEEECC >Mature Secondary Structure MRVSLISAAGVAALILAACAPAAEAPAPDAIAAPAAEAIQDDHAGMHGDDAGAEADAPVD CEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCCC RGVIAGSLALLEGSILVPPAGRDVTAGFGTFAAGARAVTIVGAEASFAQAVELHTHEMSD CCHHHHEHEEECCCEEECCCCCCCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHCCCC DGKMAMRKVDAFPVPANGDRALKRGGDHMMFFGVQPDALTPGAAVTVLVRAQFEDGTTEE CHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCE IEVPFTVAAQE EECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA