Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yfiS [H]

Identifier: 114799799

GI number: 114799799

Start: 2541876

End: 2543516

Strand: Direct

Name: yfiS [H]

Synonym: HNE_2432

Alternate gene names: 114799799

Gene position: 2541876-2543516 (Clockwise)

Preceding gene: 114797496

Following gene: 114799729

Centisome position: 68.61

GC content: 64.72

Gene sequence:

>1641_bases
ATGACTGACGCGCCTGCCCCCAGCCCCTTCTCCATTCCCCTGTTCAAACGCATCTGGGTGGCCAATATCGCCTCGCAGTT
TGGCGGGCTAATCCAGAGCGTGGGCGCGGCCTGGCTGATGGTGCAGCTGGGCGGAAGCGAAACGCAGATCGCGCTGGTGC
AGGCTTCTGTAACGCTGCCGATCATGATCCTGTCGCTGCTGTCAGGTGCGATTGCCGACAACTATCCCCGGCGTACCGTG
ATGCTGCTGTCGCAGGTCTACATGTTCATCGTGTCGGCCGTGCTTTGCGTATTTGCGTTCATGAACGGGCTGAGCCCGTG
GCTGCTGCTGACATTCACATTTCTGCTGGGCTGCGGAACTGCGCTGAACGCGCCTTCCTGGCAGGCGACCGTAGGCGATA
TTGTCCCGCGCCAGACGATTGCGGCGGCCGTTTCCATGAACAGCCTCGGCTTCAACATTGCCCGCACGGCCGGGCCGGCG
CTCGGCGGGGCGATTGTGGCGGCGGCAGGGGCAGCGGCGGCGTTTGCCGTGAATGTGCTGAGCTATCTGGGCATCATTTA
TGTGCTGCTGGCGTGGAAACCGGAGAAACCTCTGAAACCGGCGCTGAAGGAAGACCTGCGCACAGCGATCGGGGCCGGTG
TGCGCTATGTGTCGATGTCGCCCCCTATCCGGCAGGTGATGGCGCGGGCGGCGCTGTTTGGCATCGCGGCGAGCGCGGTG
CTTTCCCTCCTGCCGCTGGTGGCGCAGGAACTGGTCGGCGGCGGGGCGGTGACGTTTGGTATTCTCTCCGGCGCCTTCGG
GATCGGCGCGGTGATCGGGGCGCTCTCCAATGCGCGCCTGCGGCGGCGCTTCACCGCCGAGAGCATTCTGCGGATGACGA
TCTCGATGATCATTGCGGGGGTGGTGATTGTAGCCTTCAGCCGGGTGTTGCCCCTTACGGTGGTCGGCCTGGTGATCTGC
GGGTCCGGCTGGCTGCTGTCGATGGCGACCATGAATGTGACGGTGCAGATGGCCGCGCCTCGCTGGGTGGTCGGGCGGGC
ACTGTCGCTTTACCAGATGGCGGTGTTCGGGGCGATGGCTGTGGGAAGCTGGATCACCGGGCAACTGGCGGAGAATTACG
GGGTAATGCAGGCGCTGCTGACGATGGCCGCCGTGCAATCGGTGAGCCTGTTTGCCGGCCTCTTCCTGCGCCTGCCCCAG
GTGGAGGAGATGAACCTCGACCTGACGGGACGCTGGCGCCAACCGGACATGGAGGTGCCGGTGGAGCCGCGCAGCGGGCC
GGTGCATGTGTCGGTGAAGTATCGCATTCTCGAAGCGGATATTCCCCGCTTCATGGCCGCCATGAATGAACGGCGCCGCA
TTCACCTGCGCGACGGGGCGCGGGCGTGGTCGCTGGTGCGCGACCTGGGGGACGCGGAGATATGGCTGGAGCAATACAGC
TTTGCGCGGTGGCTGGACTATGTGCTGCACAATGAACGGCGCACCCATGCCGATGATGTGAGTATCAACATCATCCGTTC
CCTGCACCAGGGCAGCTGGCCGCCAGAGGTGCACCGGATGCTGGAGCGGCAGGTGACGAGCGTGTCGTATGATCCCGAGC
TTGCCTCGCCCACCTCAAGCGACCCGACCCGGCCGCACTGA

Upstream 100 bases:

>100_bases
TTGCGGGTTCTATTCAGAGCCCTGAACGCAGCTGGGACCGCCCCCTTGCGCTGAGGGGCGATCGCTTTCACCATCGGACA
TCTGATTTAGATTGTTCGTA

Downstream 100 bases:

>100_bases
CTTTCCCTTCCGTCGGGGCTGGCCAATGGGGCTGGCGCCATGCTTTGACTGGCGCCGACAAGACCTGACCCAATCCGGAC
ACGTGGAGACATCGACCAAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MTDAPAPSPFSIPLFKRIWVANIASQFGGLIQSVGAAWLMVQLGGSETQIALVQASVTLPIMILSLLSGAIADNYPRRTV
MLLSQVYMFIVSAVLCVFAFMNGLSPWLLLTFTFLLGCGTALNAPSWQATVGDIVPRQTIAAAVSMNSLGFNIARTAGPA
LGGAIVAAAGAAAAFAVNVLSYLGIIYVLLAWKPEKPLKPALKEDLRTAIGAGVRYVSMSPPIRQVMARAALFGIAASAV
LSLLPLVAQELVGGGAVTFGILSGAFGIGAVIGALSNARLRRRFTAESILRMTISMIIAGVVIVAFSRVLPLTVVGLVIC
GSGWLLSMATMNVTVQMAAPRWVVGRALSLYQMAVFGAMAVGSWITGQLAENYGVMQALLTMAAVQSVSLFAGLFLRLPQ
VEEMNLDLTGRWRQPDMEVPVEPRSGPVHVSVKYRILEADIPRFMAAMNERRRIHLRDGARAWSLVRDLGDAEIWLEQYS
FARWLDYVLHNERRTHADDVSINIIRSLHQGSWPPEVHRMLERQVTSVSYDPELASPTSSDPTRPH

Sequences:

>Translated_546_residues
MTDAPAPSPFSIPLFKRIWVANIASQFGGLIQSVGAAWLMVQLGGSETQIALVQASVTLPIMILSLLSGAIADNYPRRTV
MLLSQVYMFIVSAVLCVFAFMNGLSPWLLLTFTFLLGCGTALNAPSWQATVGDIVPRQTIAAAVSMNSLGFNIARTAGPA
LGGAIVAAAGAAAAFAVNVLSYLGIIYVLLAWKPEKPLKPALKEDLRTAIGAGVRYVSMSPPIRQVMARAALFGIAASAV
LSLLPLVAQELVGGGAVTFGILSGAFGIGAVIGALSNARLRRRFTAESILRMTISMIIAGVVIVAFSRVLPLTVVGLVIC
GSGWLLSMATMNVTVQMAAPRWVVGRALSLYQMAVFGAMAVGSWITGQLAENYGVMQALLTMAAVQSVSLFAGLFLRLPQ
VEEMNLDLTGRWRQPDMEVPVEPRSGPVHVSVKYRILEADIPRFMAAMNERRRIHLRDGARAWSLVRDLGDAEIWLEQYS
FARWLDYVLHNERRTHADDVSINIIRSLHQGSWPPEVHRMLERQVTSVSYDPELASPTSSDPTRPH
>Mature_545_residues
TDAPAPSPFSIPLFKRIWVANIASQFGGLIQSVGAAWLMVQLGGSETQIALVQASVTLPIMILSLLSGAIADNYPRRTVM
LLSQVYMFIVSAVLCVFAFMNGLSPWLLLTFTFLLGCGTALNAPSWQATVGDIVPRQTIAAAVSMNSLGFNIARTAGPAL
GGAIVAAAGAAAAFAVNVLSYLGIIYVLLAWKPEKPLKPALKEDLRTAIGAGVRYVSMSPPIRQVMARAALFGIAASAVL
SLLPLVAQELVGGGAVTFGILSGAFGIGAVIGALSNARLRRRFTAESILRMTISMIIAGVVIVAFSRVLPLTVVGLVICG
SGWLLSMATMNVTVQMAAPRWVVGRALSLYQMAVFGAMAVGSWITGQLAENYGVMQALLTMAAVQSVSLFAGLFLRLPQV
EEMNLDLTGRWRQPDMEVPVEPRSGPVHVSVKYRILEADIPRFMAAMNERRRIHLRDGARAWSLVRDLGDAEIWLEQYSF
ARWLDYVLHNERRTHADDVSINIIRSLHQGSWPPEVHRMLERQVTSVSYDPELASPTSSDPTRPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 58893; Mature: 58762

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPAPSPFSIPLFKRIWVANIASQFGGLIQSVGAAWLMVQLGGSETQIALVQASVTLP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEHHHHHH
IMILSLLSGAIADNYPRRTVMLLSQVYMFIVSAVLCVFAFMNGLSPWLLLTFTFLLGCGT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
ALNAPSWQATVGDIVPRQTIAAAVSMNSLGFNIARTAGPALGGAIVAAAGAAAAFAVNVL
CCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SYLGIIYVLLAWKPEKPLKPALKEDLRTAIGAGVRYVSMSPPIRQVMARAALFGIAASAV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LSLLPLVAQELVGGGAVTFGILSGAFGIGAVIGALSNARLRRRFTAESILRMTISMIIAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVIVAFSRVLPLTVVGLVICGSGWLLSMATMNVTVQMAAPRWVVGRALSLYQMAVFGAMA
HHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VGSWITGQLAENYGVMQALLTMAAVQSVSLFAGLFLRLPQVEEMNLDLTGRWRQPDMEVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCCCCCCC
VEPRSGPVHVSVKYRILEADIPRFMAAMNERRRIHLRDGARAWSLVRDLGDAEIWLEQYS
CCCCCCCEEEEEEEEEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHH
FARWLDYVLHNERRTHADDVSINIIRSLHQGSWPPEVHRMLERQVTSVSYDPELASPTSS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
DPTRPH
CCCCCC
>Mature Secondary Structure 
TDAPAPSPFSIPLFKRIWVANIASQFGGLIQSVGAAWLMVQLGGSETQIALVQASVTLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEHHHHHH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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]