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The map label for this gene is nolR [H]

Identifier: 114797496

GI number: 114797496

Start: 2541477

End: 2541800

Strand: Direct

Name: nolR [H]

Synonym: HNE_2431

Alternate gene names: 114797496

Gene position: 2541477-2541800 (Clockwise)

Preceding gene: 114798247

Following gene: 114799799

Centisome position: 68.6

GC content: 63.27

Gene sequence:

>324_bases
ATGCCCCTCCCCAAAGGTGAGCGCAGTAAGGCACTGATCATCGTTTCGAGCCGCGTTGAGGAGGCGGCAGAAGTGATGAA
GGCGATGGCGAGCGAGACCCGCCTCAAGATCATGTGCGCGTTGAGCGAAGGAGAGTTGCCGGTGAACCAGCTCGCCCAGC
TGACCGGCCAGAGCCAGTCGGCGGTTTCCCAGCATCTGGCAAAGCTGCGCGCCGCTGGCCTTGTGACCAGCCGGCGGGCG
GGGCAAACGATTCATTACCGCTGCCGCGCCGGGATCGCGCAGCAGATCATCGACACGCTTTGCGGGTTCTATTCAGAGCC
CTGA

Upstream 100 bases:

>100_bases
ATTCCAGCGATTTATATCGCCATTCGCGGGCCAGACTGGCGCCCGGCGGCGTCAGATCCAGGACAAAGCGTGACAAATCT
GGACAAATCTGGACACGATA

Downstream 100 bases:

>100_bases
ACGCAGCTGGGACCGCCCCCTTGCGCTGAGGGGCGATCGCTTTCACCATCGGACATCTGATTTAGATTGTTCGTAATGAC
TGACGCGCCTGCCCCCAGCC

Product: putative transcriptional regulator NolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPLPKGERSKALIIVSSRVEEAAEVMKAMASETRLKIMCALSEGELPVNQLAQLTGQSQSAVSQHLAKLRAAGLVTSRRA
GQTIHYRCRAGIAQQIIDTLCGFYSEP

Sequences:

>Translated_107_residues
MPLPKGERSKALIIVSSRVEEAAEVMKAMASETRLKIMCALSEGELPVNQLAQLTGQSQSAVSQHLAKLRAAGLVTSRRA
GQTIHYRCRAGIAQQIIDTLCGFYSEP
>Mature_106_residues
PLPKGERSKALIIVSSRVEEAAEVMKAMASETRLKIMCALSEGELPVNQLAQLTGQSQSAVSQHLAKLRAAGLVTSRRAG
QTIHYRCRAGIAQQIIDTLCGFYSEP

Specific function: Negative transacting factor controlling the nod regulon. May control the expression of nodD1, nodD2, nodD3 and nodABC genes [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789021, Length=86, Percent_Identity=41.8604651162791, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11569; Mature: 11437

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPKGERSKALIIVSSRVEEAAEVMKAMASETRLKIMCALSEGELPVNQLAQLTGQSQS
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCHH
AVSQHLAKLRAAGLVTSRRAGQTIHYRCRAGIAQQIIDTLCGFYSEP
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLPKGERSKALIIVSSRVEEAAEVMKAMASETRLKIMCALSEGELPVNQLAQLTGQSQS
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCHH
AVSQHLAKLRAAGLVTSRRAGQTIHYRCRAGIAQQIIDTLCGFYSEP
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840615 [H]