| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yjgP [C]
Identifier: 114799726
GI number: 114799726
Start: 2374920
End: 2376062
Strand: Direct
Name: yjgP [C]
Synonym: HNE_2274
Alternate gene names: 114799726
Gene position: 2374920-2376062 (Clockwise)
Preceding gene: 114797382
Following gene: 114797396
Centisome position: 64.1
GC content: 61.85
Gene sequence:
>1143_bases ATGACCAAGATCCAGCTGCATCTATTAAGGCAGGTTCTGCAGGCCGTGCTGATCATTGTCGGCAGCCTGGTAATGGTTGC GCTGCTGGCGCAGGGCCTGTCGCGCACCGATGTGATCCTGGAAAACCGGCAATCGGCGATCACCTATTTCTATATCGTCA TGCTGGGCTCGCCGCAGGTGATTGCCCTGCTGCTGCCGCTGGCGCTGTTCGTGGCAGGGGTCTGGTCGCTTAACCGTATC CACAAGGATTCGGAGATCGTGGTGGCGCAGGCTGCGGGCATGACACGCTGGCAGGTGGCTTCACCCGTGCTGCGCCTGGC GATGGTGTGCCTTGTGGTACATCTGGGAGTGAACCTCTGGGTTCAGCCGATGTCGCAGCGGGCGATGCGGGAAGCCGTTG CCGAGGCGCGAGCAGATCTTGCCGCCGCCCTGTTCCGGGCCGGCCAGTTCACCTCCAATGGCGAACGCCTCACATTTTAC GCGCGCGATCAGGTCGGCGGGGAACTGCGCGGGGTGCTGATCTCCGACATGACGGACCCCGAATTCCCCATGGACATTCT GGCGCGCTCGGCGGCGCTGGTGTCGGTGGATGGCCAGCCCACGCTGCTGCTGCGCGACGCGCTGAGCCAGCAGCTGGACG AAAACCAGCAGCTCTCGGTGCTGGAGTTCGATCAGTACATGTTCGATCTGTCGGACTTCATGAAGGAGGATTCAGAGCTG GTTCTGAAAGCCTCTGACAAATTCCTGCATGAGCTCATCTTTCTCGACCGAAAGAACTACTTTGAAAACAAGGAAGCCGA CAGTTTCCTGGCCGAGGCAAATGCGCGGCTGACCTCGCCGATGCTGAACATCGTGATGGCGCTGCTGGCGATCTTTGCGG TGCTTGGGGGGGATTTCAGCCGGCAGGGCTATGCCAAGCGGATCGGTCTGGCGACCGGGGGGGCGATCTTCGTTCTGGTG TTGCATCTGGCCTTGCAGTCAGCCGCCGCCGATGACCCCGCCCTCAACATTGCCTTGTGGGTGGTGCCCATTCTGGCCGG GATCATCCTGGGATGGATCTATTTCGGCCGGGGCGCCCGGATTGGCCGCAAACAATGGGTGGCGGCGCCGCCACCGGGCT ACATTCCGGGAGCACGCAGCTGA
Upstream 100 bases:
>100_bases CGGAAACTAAGCATCGACGCGCCAAGCGCAACTCGTTAGCTAGAGAATTGCTGCCAATTCCGGTTCTGTTTCTGGACGCT AGAGTGACCGCACCCCACCC
Downstream 100 bases:
>100_bases TGCCGGCCTTCTCGCGCATTCAGCGTTACATCCTGCGGGAATGCCTCTCCGGCCTGGTGCTGGTGCTGGGCATCCTATTG CTGGCGATCCTGATGATCGA
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQVIALLLPLALFVAGVWSLNRI HKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLWVQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFY ARDQVGGELRGVLISDMTDPEFPMDILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKEDSEL VLKASDKFLHELIFLDRKNYFENKEADSFLAEANARLTSPMLNIVMALLAIFAVLGGDFSRQGYAKRIGLATGGAIFVLV LHLALQSAAADDPALNIALWVVPILAGIILGWIYFGRGARIGRKQWVAAPPPGYIPGARS
Sequences:
>Translated_380_residues MTKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQVIALLLPLALFVAGVWSLNRI HKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLWVQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFY ARDQVGGELRGVLISDMTDPEFPMDILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKEDSEL VLKASDKFLHELIFLDRKNYFENKEADSFLAEANARLTSPMLNIVMALLAIFAVLGGDFSRQGYAKRIGLATGGAIFVLV LHLALQSAAADDPALNIALWVVPILAGIILGWIYFGRGARIGRKQWVAAPPPGYIPGARS >Mature_379_residues TKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQVIALLLPLALFVAGVWSLNRIH KDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLWVQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFYA RDQVGGELRGVLISDMTDPEFPMDILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKEDSELV LKASDKFLHELIFLDRKNYFENKEADSFLAEANARLTSPMLNIVMALLAIFAVLGGDFSRQGYAKRIGLATGGAIFVLVL HLALQSAAADDPALNIALWVVPILAGIILGWIYFGRGARIGRKQWVAAPPPGYIPGARS
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 41702; Mature: 41571
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHEEEEEEECCCHH IALLLPLALFVAGVWSLNRIHKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLW HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHE VQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFYARDQVGGELRGVLISDMTDP ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCEEEECCCCC EFPMDILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKEDSEL CCCHHHHHCCHHEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH VLKASDKFLHELIFLDRKNYFENKEADSFLAEANARLTSPMLNIVMALLAIFAVLGGDFS EEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC RQGYAKRIGLATGGAIFVLVLHLALQSAAADDPALNIALWVVPILAGIILGWIYFGRGAR CCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC IGRKQWVAAPPPGYIPGARS CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKIQLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENRQSAITYFYIVMLGSPQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHEEEEEEECCCHH IALLLPLALFVAGVWSLNRIHKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVNLW HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHE VQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFYARDQVGGELRGVLISDMTDP ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHCEEEECCCCC EFPMDILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKEDSEL CCCHHHHHCCHHEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH VLKASDKFLHELIFLDRKNYFENKEADSFLAEANARLTSPMLNIVMALLAIFAVLGGDFS EEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC RQGYAKRIGLATGGAIFVLVLHLALQSAAADDPALNIALWVVPILAGIILGWIYFGRGAR CCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC IGRKQWVAAPPPGYIPGARS CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]