Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is yjgQ [C]

Identifier: 114797396

GI number: 114797396

Start: 2376062

End: 2377183

Strand: Direct

Name: yjgQ [C]

Synonym: HNE_2275

Alternate gene names: 114797396

Gene position: 2376062-2377183 (Clockwise)

Preceding gene: 114799726

Following gene: 114799315

Centisome position: 64.13

GC content: 62.66

Gene sequence:

>1122_bases
ATGCCGGCCTTCTCGCGCATTCAGCGTTACATCCTGCGGGAATGCCTCTCCGGCCTGGTGCTGGTGCTGGGCATCCTATT
GCTGGCGATCCTGATGATCGATGTGGTGGAGCAGATGCGCACTATCGGCGGCGATGTGGAAATCACGCTGCTGGACGCGC
TGCGCCTGTCGCTGATGAAGCTGCCGATGATTATCGAACAGACGCTGCCCTTTGCCCTTCTGGCGGCCACGATGATGGCG
TTCACCCGGCTCAACCGGCGCTCGGAGCTGTCGATCATCCGTGCCAGCGGGCTGTCAGCCTGGCGGTTTCTGACCCCGGT
GATCGTTCTGGGTGTGGCGCTCGGTATATTCTCTTCCCTGGCGCTCAACCCGCTTGCCGCGCGGCTGAGCCAGTCGTTTG
AGGCGGAACGCGCGCGGTTGCTGGATGTGGGCCGGGAGGTAGTTCAGGTGGCTGAAACGGGCGTCTGGCTGCGCCAGGGC
GACGATTCCAGCCAGTATGTGATCCACGCGCGGCGGGTGGAGGATGGGGGCCGGACCCTGCTAGACGTCAAGATCATCGA
GGAACAGCGCCTCTATAATGGCCGCCAGCCAACCAATGATTTTGCCTTTGTACGCCGGATCGATGCGGAAAAGGCCGTGT
TGAACGAAGGCTTCTGGCAGCTGGAGAACCTGGTCGAGAACCTGCCCAACCAGGCCCCTGAACGGCGCGCGACGCTGGCC
ATTCCGACCTCGCTGGACGCAGTACGGCTGCTCGATGAGTACGCCTCGCCCAATACGGTCGGTTTCTGGGAATTACCCCG
GTTCATTTTTGAAACACGGGCGGCTGGCCTCGACACTTCGCGCTATACGATGCGGCTTTTCACCCTAACGGCGACGCCTG
TGCTTTTTACCGCGATGGCGCTGATCGGGGCCCTGGCCTGCCTCCGGCTGCAACGCCTGGGGGGCACTTCAAGACTGCTC
GCAACCGGGGTGCTGGCGGCCATTGGGCTTTATTTCTTCACGCAATTTTCCTCCAGCCTGGGGTCAACCGGCGCGGCCCC
GGCGGTCGTGGCGGCATGGTCACCGCCCCTGTTTGTGCTGTTCGTCAGCCTGGCCTTTATCGCCTACCGGGAAGATGGCT
GA

Upstream 100 bases:

>100_bases
TCATCCTGGGATGGATCTATTTCGGCCGGGGCGCCCGGATTGGCCGCAAACAATGGGTGGCGGCGCCGCCACCGGGCTAC
ATTCCGGGAGCACGCAGCTG

Downstream 100 bases:

>100_bases
ACCGTAGCGGCCTTGACAGCCCCTGCCGCTACAGACCATCTCTGCCGCCCTTGAAGAGGTGGACCCCTGCATGAAACTTG
TCGTCGTAGAGTCTCCGGCA

Product: YjgP/YjgQ permease

Products: NA

Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; Permease Protein; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Transmembrane Protein; Permeases; Transporter YjgP/YjgQ; Integral Membrane Protein; Permease YjgP

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMA
FTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQG
DDSSQYVIHARRVEDGGRTLLDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA
IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIGALACLRLQRLGGTSRLL
ATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLAFIAYREDG

Sequences:

>Translated_373_residues
MPAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMA
FTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQG
DDSSQYVIHARRVEDGGRTLLDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA
IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIGALACLRLQRLGGTSRLL
ATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLAFIAYREDG
>Mature_372_residues
PAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMAF
TRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGD
DSSQYVIHARRVEDGGRTLLDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLAI
PTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIGALACLRLQRLGGTSRLLA
TGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLAFIAYREDG

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41209; Mature: 41078

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
LPMIIEQTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCEE
LDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA
EEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMA
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHH
LIGALACLRLQRLGGTSRLLATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH
FVSLAFIAYREDG
HHHHHHHHHCCCC
>Mature Secondary Structure 
PAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
LPMIIEQTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCEE
LDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA
EEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMA
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHH
LIGALACLRLQRLGGTSRLLATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH
FVSLAFIAYREDG
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA