| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yjgQ [C]
Identifier: 114797396
GI number: 114797396
Start: 2376062
End: 2377183
Strand: Direct
Name: yjgQ [C]
Synonym: HNE_2275
Alternate gene names: 114797396
Gene position: 2376062-2377183 (Clockwise)
Preceding gene: 114799726
Following gene: 114799315
Centisome position: 64.13
GC content: 62.66
Gene sequence:
>1122_bases ATGCCGGCCTTCTCGCGCATTCAGCGTTACATCCTGCGGGAATGCCTCTCCGGCCTGGTGCTGGTGCTGGGCATCCTATT GCTGGCGATCCTGATGATCGATGTGGTGGAGCAGATGCGCACTATCGGCGGCGATGTGGAAATCACGCTGCTGGACGCGC TGCGCCTGTCGCTGATGAAGCTGCCGATGATTATCGAACAGACGCTGCCCTTTGCCCTTCTGGCGGCCACGATGATGGCG TTCACCCGGCTCAACCGGCGCTCGGAGCTGTCGATCATCCGTGCCAGCGGGCTGTCAGCCTGGCGGTTTCTGACCCCGGT GATCGTTCTGGGTGTGGCGCTCGGTATATTCTCTTCCCTGGCGCTCAACCCGCTTGCCGCGCGGCTGAGCCAGTCGTTTG AGGCGGAACGCGCGCGGTTGCTGGATGTGGGCCGGGAGGTAGTTCAGGTGGCTGAAACGGGCGTCTGGCTGCGCCAGGGC GACGATTCCAGCCAGTATGTGATCCACGCGCGGCGGGTGGAGGATGGGGGCCGGACCCTGCTAGACGTCAAGATCATCGA GGAACAGCGCCTCTATAATGGCCGCCAGCCAACCAATGATTTTGCCTTTGTACGCCGGATCGATGCGGAAAAGGCCGTGT TGAACGAAGGCTTCTGGCAGCTGGAGAACCTGGTCGAGAACCTGCCCAACCAGGCCCCTGAACGGCGCGCGACGCTGGCC ATTCCGACCTCGCTGGACGCAGTACGGCTGCTCGATGAGTACGCCTCGCCCAATACGGTCGGTTTCTGGGAATTACCCCG GTTCATTTTTGAAACACGGGCGGCTGGCCTCGACACTTCGCGCTATACGATGCGGCTTTTCACCCTAACGGCGACGCCTG TGCTTTTTACCGCGATGGCGCTGATCGGGGCCCTGGCCTGCCTCCGGCTGCAACGCCTGGGGGGCACTTCAAGACTGCTC GCAACCGGGGTGCTGGCGGCCATTGGGCTTTATTTCTTCACGCAATTTTCCTCCAGCCTGGGGTCAACCGGCGCGGCCCC GGCGGTCGTGGCGGCATGGTCACCGCCCCTGTTTGTGCTGTTCGTCAGCCTGGCCTTTATCGCCTACCGGGAAGATGGCT GA
Upstream 100 bases:
>100_bases TCATCCTGGGATGGATCTATTTCGGCCGGGGCGCCCGGATTGGCCGCAAACAATGGGTGGCGGCGCCGCCACCGGGCTAC ATTCCGGGAGCACGCAGCTG
Downstream 100 bases:
>100_bases ACCGTAGCGGCCTTGACAGCCCCTGCCGCTACAGACCATCTCTGCCGCCCTTGAAGAGGTGGACCCCTGCATGAAACTTG TCGTCGTAGAGTCTCCGGCA
Product: YjgP/YjgQ permease
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; Permease Protein; YjgP/YjgQ Family Permease; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Transmembrane Protein; Permeases; Transporter YjgP/YjgQ; Integral Membrane Protein; Permease YjgP
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MPAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMA FTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQG DDSSQYVIHARRVEDGGRTLLDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIGALACLRLQRLGGTSRLL ATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLAFIAYREDG
Sequences:
>Translated_373_residues MPAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMA FTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQG DDSSQYVIHARRVEDGGRTLLDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIGALACLRLQRLGGTSRLL ATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLAFIAYREDG >Mature_372_residues PAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIEQTLPFALLAATMMAF TRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGD DSSQYVIHARRVEDGGRTLLDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLAI PTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMALIGALACLRLQRLGGTSRLLA TGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLAFIAYREDG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41209; Mature: 41078
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH LPMIIEQTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCEE LDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA EEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMA CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHH LIGALACLRLQRLGGTSRLLATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH FVSLAFIAYREDG HHHHHHHHHCCCC >Mature Secondary Structure PAFSRIQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH LPMIIEQTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ALNPLAARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEECCCCCEE LDVKIIEEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLA EEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE IPTSLDAVRLLDEYASPNTVGFWELPRFIFETRAAGLDTSRYTMRLFTLTATPVLFTAMA CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHH LIGALACLRLQRLGGTSRLLATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH FVSLAFIAYREDG HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA