| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799644
Identifier: 114799644
GI number: 114799644
Start: 2231426
End: 2231965
Strand: Direct
Name: 114799644
Synonym: HNE_2145
Alternate gene names: NA
Gene position: 2231426-2231965 (Clockwise)
Preceding gene: 114799836
Following gene: 114797074
Centisome position: 60.23
GC content: 63.15
Gene sequence:
>540_bases ATGACGATACGCAACAGAACACATGTTTGGGCCGTTCTCGCCGCGACCCTCGCGCTGGCGGCCTGCGGCGGCGCGAGCGA TACGGCCGGCAAAAGCAATGGCAGCAAGGATGCCGCAGGCGCTGAGCCCGCCGCAAGCACCTCGCCCCTCGCCGCGCCGG GCGAAGAAGGCGCCATTGCCGTCACGATCGAGGCCACCACCCAATTCGATGCCGGCTGCATGCTTGCCCCCGGTCTCACC AATCCAAGTGGGGAGCAATTTACGCTGTATGCGGACATCGGTGGGCGCCGGGGTGAAGCTGGCACGGTCACGGCGCTGCT TGATGGGGAGAATGCCCTCACTATGGAGATTACCGGCTATACCGATTTTGGCGGACAGATCGGTCCAACCAGCCTCAGCG GTCGCTGCGAAGTCCTCGATCTGGTCATCGGCAATGTCCGCTGCCGCGAAGGCGTTGGCATCGAAGGCGAGATCGGCCCC TGCCCGGCACCGGTCAGCTTCACCATCTCCGAAAATGTTCGTTCCATGAGGGTAAAGTAA
Upstream 100 bases:
>100_bases GCGGGAAAATTTTTTCTACGGAGAAATGTCCGGATCTGGCACGGCATCTCGTTCTTCTCTCCTGAACAGGGTTTACCCCG CGCGCTTCAGGAGAAAGCAA
Downstream 100 bases:
>100_bases CGGTCTTAAAGCGCGCCTGAAACGGCCAGTTCCGCGAACGCCCAGTAGAGAGACATTTCCTGAAACTGGGCGCCGCGCCC GCCGCTGGACTGGTGGCCCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTIRNRTHVWAVLAATLALAACGGASDTAGKSNGSKDAAGAEPAASTSPLAAPGEEGAIAVTIEATTQFDAGCMLAPGLT NPSGEQFTLYADIGGRRGEAGTVTALLDGENALTMEITGYTDFGGQIGPTSLSGRCEVLDLVIGNVRCREGVGIEGEIGP CPAPVSFTISENVRSMRVK
Sequences:
>Translated_179_residues MTIRNRTHVWAVLAATLALAACGGASDTAGKSNGSKDAAGAEPAASTSPLAAPGEEGAIAVTIEATTQFDAGCMLAPGLT NPSGEQFTLYADIGGRRGEAGTVTALLDGENALTMEITGYTDFGGQIGPTSLSGRCEVLDLVIGNVRCREGVGIEGEIGP CPAPVSFTISENVRSMRVK >Mature_178_residues TIRNRTHVWAVLAATLALAACGGASDTAGKSNGSKDAAGAEPAASTSPLAAPGEEGAIAVTIEATTQFDAGCMLAPGLTN PSGEQFTLYADIGGRRGEAGTVTALLDGENALTMEITGYTDFGGQIGPTSLSGRCEVLDLVIGNVRCREGVGIEGEIGPC PAPVSFTISENVRSMRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18087; Mature: 17956
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRNRTHVWAVLAATLALAACGGASDTAGKSNGSKDAAGAEPAASTSPLAAPGEEGAIA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VTIEATTQFDAGCMLAPGLTNPSGEQFTLYADIGGRRGEAGTVTALLDGENALTMEITGY EEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECE TDFGGQIGPTSLSGRCEVLDLVIGNVRCREGVGIEGEIGPCPAPVSFTISENVRSMRVK ECCCCCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCEEECCC >Mature Secondary Structure TIRNRTHVWAVLAATLALAACGGASDTAGKSNGSKDAAGAEPAASTSPLAAPGEEGAIA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VTIEATTQFDAGCMLAPGLTNPSGEQFTLYADIGGRRGEAGTVTALLDGENALTMEITGY EEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECE TDFGGQIGPTSLSGRCEVLDLVIGNVRCREGVGIEGEIGPCPAPVSFTISENVRSMRVK ECCCCCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA