Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is metA
Identifier: 114799570
GI number: 114799570
Start: 3445416
End: 3446333
Strand: Reverse
Name: metA
Synonym: HNE_3283
Alternate gene names: 114799570
Gene position: 3446333-3445416 (Counterclockwise)
Preceding gene: 114800473
Following gene: 114797258
Centisome position: 93.02
GC content: 59.48
Gene sequence:
>918_bases ATGCCGATCCGGATTCCTGATACGCTGCCTGCGCGTGAGACGCTGCTGAAAGAGGGCGTGGCCGTGATGACGGAGACTGA TGCCGTGCGCCAGGACATCCGCCCGCTGCAGATCGCGCTTTTGAACCTCATGCCCAACAAGATCCGCACCGAGACGCAGA TCGCCCGGCTGATCGGCGCCTCGCCCTTGCAGGTGGAGCTGACGCTCGTGCGCGTGGGCGGGCACACGCCGAAGAATACC TCGCAGGAACATCTGATAAGCTTTTACCAGACCTGGGAAGAAATCCGGGAGCGGAAGTTTGATGGCTTCATCATCACCGG CGCGCCGATTGAGCAGATGCCGTTTGAAGAGGTGAATTATTGGGAAGAGCTGACCCAGATATTCGACTGGACGCAGACGA ACGTGCATTCGCCTTTCTATATCTGCTGGGGCGCGATGGCGGCGGCGTATCATTTCCATGGCCTGCCGAAATACCAACTT GAAGCGAAAGCTTTCGGCGTGTTTCGCCACCGGAATCTTGATCTGGCCTCGCCCTATCTCTCGGGCTTTTCCGATGATTT TGCCATTCCCGTTTCGCGCTGGACCGAAGTGCGCCGCGCCGACGTTCTGGAGCGCCAGTCCCTCCGCCTGCTGATCGACA GTGATGACACAGGCCCCTGCCTGCTGGAAGACCGCGCGCGGCGCAGCCTCTATATGTTCAACCATGTCGAGTATGACTCC TTCTCCCTGAAGGAGGAGTTTGAGCGCGACCGGGAAGCGGGCAAGCAGATCCAGGTGCCGTTTGGTTACTATCCCGGTGA TGACCCCGCGCGCCAGCCGCTCAACCGCTGGCGCAGCCATGCCCATCTCCTGTTCGGTAACTGGATCAACCAGACGTACC AGTCGACACCGTTCAGCCTTGACGAAATCGGGCAATAG
Upstream 100 bases:
>100_bases GCCGAGATGCAGGAAACCCCGGCTTTCCGGGCCTGCCTTTCCCCCTCCGTTGCGGACGTGTTTATTGGACCTGAAGCGGG CCGATGAGGATGTTTGAGCC
Downstream 100 bases:
>100_bases ACCAGAACTGAGGCATGACCAGTTTTGCCGCAGAACCTGAGCACGTAACAGAGATCCGCCGCCAGCTTGCCCGCTGGGTG GCCGAGAAGATGCCGCGCGA
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPIRIPDTLPARETLLKEGVAVMTETDAVRQDIRPLQIALLNLMPNKIRTETQIARLIGASPLQVELTLVRVGGHTPKNT SQEHLISFYQTWEEIRERKFDGFIITGAPIEQMPFEEVNYWEELTQIFDWTQTNVHSPFYICWGAMAAAYHFHGLPKYQL EAKAFGVFRHRNLDLASPYLSGFSDDFAIPVSRWTEVRRADVLERQSLRLLIDSDDTGPCLLEDRARRSLYMFNHVEYDS FSLKEEFERDREAGKQIQVPFGYYPGDDPARQPLNRWRSHAHLLFGNWINQTYQSTPFSLDEIGQ
Sequences:
>Translated_305_residues MPIRIPDTLPARETLLKEGVAVMTETDAVRQDIRPLQIALLNLMPNKIRTETQIARLIGASPLQVELTLVRVGGHTPKNT SQEHLISFYQTWEEIRERKFDGFIITGAPIEQMPFEEVNYWEELTQIFDWTQTNVHSPFYICWGAMAAAYHFHGLPKYQL EAKAFGVFRHRNLDLASPYLSGFSDDFAIPVSRWTEVRRADVLERQSLRLLIDSDDTGPCLLEDRARRSLYMFNHVEYDS FSLKEEFERDREAGKQIQVPFGYYPGDDPARQPLNRWRSHAHLLFGNWINQTYQSTPFSLDEIGQ >Mature_304_residues PIRIPDTLPARETLLKEGVAVMTETDAVRQDIRPLQIALLNLMPNKIRTETQIARLIGASPLQVELTLVRVGGHTPKNTS QEHLISFYQTWEEIRERKFDGFIITGAPIEQMPFEEVNYWEELTQIFDWTQTNVHSPFYICWGAMAAAYHFHGLPKYQLE AKAFGVFRHRNLDLASPYLSGFSDDFAIPVSRWTEVRRADVLERQSLRLLIDSDDTGPCLLEDRARRSLYMFNHVEYDSF SLKEEFERDREAGKQIQVPFGYYPGDDPARQPLNRWRSHAHLLFGNWINQTYQSTPFSLDEIGQ
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=301, Percent_Identity=40.8637873754153, Blast_Score=250, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_HYPNA (Q0BX37)
Other databases:
- EMBL: CP000158 - RefSeq: YP_761956.1 - ProteinModelPortal: Q0BX37 - SMR: Q0BX37 - STRING: Q0BX37 - GeneID: 4288555 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_3283 - NMPDR: fig|228405.5.peg.3144 - TIGR: HNE_3283 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - PhylomeDB: Q0BX37 - ProtClustDB: PRK05368 - BioCyc: HNEP81032:HNE_3283-MONOMER - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 35436; Mature: 35304
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRIPDTLPARETLLKEGVAVMTETDAVRQDIRPLQIALLNLMPNKIRTETQIARLIGA CCCCCCCCCCHHHHHHHCCCCEEECCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVELTLVRVGGHTPKNTSQEHLISFYQTWEEIRERKFDGFIITGAPIEQMPFEEVNY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH WEELTQIFDWTQTNVHSPFYICWGAMAAAYHFHGLPKYQLEAKAFGVFRHRNLDLASPYL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH SGFSDDFAIPVSRWTEVRRADVLERQSLRLLIDSDDTGPCLLEDRARRSLYMFNHVEYDS CCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHEEEEECCCCCC FSLKEEFERDREAGKQIQVPFGYYPGDDPARQPLNRWRSHAHLLFGNWINQTYQSTPFSL CHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DEIGQ HHCCC >Mature Secondary Structure PIRIPDTLPARETLLKEGVAVMTETDAVRQDIRPLQIALLNLMPNKIRTETQIARLIGA CCCCCCCCCHHHHHHHCCCCEEECCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVELTLVRVGGHTPKNTSQEHLISFYQTWEEIRERKFDGFIITGAPIEQMPFEEVNY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH WEELTQIFDWTQTNVHSPFYICWGAMAAAYHFHGLPKYQLEAKAFGVFRHRNLDLASPYL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH SGFSDDFAIPVSRWTEVRRADVLERQSLRLLIDSDDTGPCLLEDRARRSLYMFNHVEYDS CCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHEEEEECCCCCC FSLKEEFERDREAGKQIQVPFGYYPGDDPARQPLNRWRSHAHLLFGNWINQTYQSTPFSL CHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DEIGQ HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA