Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799560
Identifier: 114799560
GI number: 114799560
Start: 516245
End: 517321
Strand: Direct
Name: 114799560
Synonym: HNE_0521
Alternate gene names: NA
Gene position: 516245-517321 (Clockwise)
Preceding gene: 114800520
Following gene: 114799747
Centisome position: 13.93
GC content: 65.0
Gene sequence:
>1077_bases ATGGCAGCAGCGGCGGCAGTGAAACTCCCTCGGGCGTATGAGGAGCAGGAGCATGTGCCTGCCCCGGTAGACCCGACGCA CTTCATCTCGCTCGACTATGCCGAGCCGAGTCCGATCATGATCGGGTTCCAGAAAGCATGGCGTTCGTTGAAACGTATGC TGAAGATCGGCGCCGTGCTCGCCCTGGTCGGCGCCTATCCGGCCGCCGTGGTTCTCTCCAGCCATATTAACGACAAGCCG ATCGACATTCCCGCTGAACAAAGCTGGGCTGTGCCGGGCATTGCCGTCGCCATCCACAAGATTGCACGCGAGCTTGAAGG CGCCGGCTGGGCCAGCAACCGTCCGGTCTGGCATCCGCAGGCGCGTCTTACCGCGCTGCCCGCCTGGCAGTCCGGCACCG CCGAAGCGCTCTCCCAGCATATGCAGCTGATCTCCGAGCTGGCCCCCTATGAAGGCGCCCCGGACAGCGATCTCGCCGCA GCCGCCCGCCTGTTGACCGAAGTATCGGGCGAGCCGATGCGCCCCCGCCTGACAGCAGCTGCCGAAGCGCTCAACCGCTT TGATACGCGCGCCTCGCGCGGTCTCGCCATGCGCCCGATGCCGGAAGAAATCATGCCGCAGGAACTGGCATTGTTTGCCG GCTGGGCAGCGGAGGACCGCGCGGCGCTCTCCGACCAGATCAATGCCCTTCAGGAGGGCGGCGGCTGGCCTGCCAGCAAG GACGACATCACGGCGTTCTACCGCGCCAAGGCCCGCGCCCATGTCGCCCATGAGATGTTCGCCGCCAATGCGGACAAGGC CTATAACCTCTCCAACACGGCCATTCTGGTTGCCGCTGACCGGGCTGAAACGGCCTGGGGGCGCGCCGCCGAGATGAAGC CGATCCTCGTGTCCAACCAGTCGGATTCGGCCGTTCTCAATCCCAACCATCTGGCGAGCATGGCGTATTTCCTGCTGGAA GCCGAAGTGGCCTCGCGCCATCTGATTGAGTTGATGGCGCCGCCGGCCGCCGATGAGGTGATTGAGGAGACCTCCGTGGC GCAGACCGATGAGGCCGCTGAAGTAGCGCTCCCTTGA
Upstream 100 bases:
>100_bases AATTTCATGCGCAACTAGCCTGTTAATAACGGTTTAACAGCTTCATAAACGGCACAGGATGGACAAATCCACAGCACCCA GGAAGAAGCGGCGTAAAAGC
Downstream 100 bases:
>100_bases TCTCGATGGCTGGGCGGGCCATGTCAGGGGCCAGACAGTAAAGGCCCCGCCATGTTTATCCAGACCGAAGCCACGCCCAA TCCTGACACGATAAAATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MAAAAAVKLPRAYEEQEHVPAPVDPTHFISLDYAEPSPIMIGFQKAWRSLKRMLKIGAVLALVGAYPAAVVLSSHINDKP IDIPAEQSWAVPGIAVAIHKIARELEGAGWASNRPVWHPQARLTALPAWQSGTAEALSQHMQLISELAPYEGAPDSDLAA AARLLTEVSGEPMRPRLTAAAEALNRFDTRASRGLAMRPMPEEIMPQELALFAGWAAEDRAALSDQINALQEGGGWPASK DDITAFYRAKARAHVAHEMFAANADKAYNLSNTAILVAADRAETAWGRAAEMKPILVSNQSDSAVLNPNHLASMAYFLLE AEVASRHLIELMAPPAADEVIEETSVAQTDEAAEVALP
Sequences:
>Translated_358_residues MAAAAAVKLPRAYEEQEHVPAPVDPTHFISLDYAEPSPIMIGFQKAWRSLKRMLKIGAVLALVGAYPAAVVLSSHINDKP IDIPAEQSWAVPGIAVAIHKIARELEGAGWASNRPVWHPQARLTALPAWQSGTAEALSQHMQLISELAPYEGAPDSDLAA AARLLTEVSGEPMRPRLTAAAEALNRFDTRASRGLAMRPMPEEIMPQELALFAGWAAEDRAALSDQINALQEGGGWPASK DDITAFYRAKARAHVAHEMFAANADKAYNLSNTAILVAADRAETAWGRAAEMKPILVSNQSDSAVLNPNHLASMAYFLLE AEVASRHLIELMAPPAADEVIEETSVAQTDEAAEVALP >Mature_357_residues AAAAAVKLPRAYEEQEHVPAPVDPTHFISLDYAEPSPIMIGFQKAWRSLKRMLKIGAVLALVGAYPAAVVLSSHINDKPI DIPAEQSWAVPGIAVAIHKIARELEGAGWASNRPVWHPQARLTALPAWQSGTAEALSQHMQLISELAPYEGAPDSDLAAA ARLLTEVSGEPMRPRLTAAAEALNRFDTRASRGLAMRPMPEEIMPQELALFAGWAAEDRAALSDQINALQEGGGWPASKD DITAFYRAKARAHVAHEMFAANADKAYNLSNTAILVAADRAETAWGRAAEMKPILVSNQSDSAVLNPNHLASMAYFLLEA EVASRHLIELMAPPAADEVIEETSVAQTDEAAEVALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38463; Mature: 38332
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAAAVKLPRAYEEQEHVPAPVDPTHFISLDYAEPSPIMIGFQKAWRSLKRMLKIGAVL CCCCHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHH ALVGAYPAAVVLSSHINDKPIDIPAEQSWAVPGIAVAIHKIARELEGAGWASNRPVWHPQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARLTALPAWQSGTAEALSQHMQLISELAPYEGAPDSDLAAAARLLTEVSGEPMRPRLTAA HHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH AEALNRFDTRASRGLAMRPMPEEIMPQELALFAGWAAEDRAALSDQINALQEGGGWPASK HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC DDITAFYRAKARAHVAHEMFAANADKAYNLSNTAILVAADRAETAWGRAAEMKPILVSNQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCEEEECC SDSAVLNPNHLASMAYFLLEAEVASRHLIELMAPPAADEVIEETSVAQTDEAAEVALP CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure AAAAAVKLPRAYEEQEHVPAPVDPTHFISLDYAEPSPIMIGFQKAWRSLKRMLKIGAVL CCCHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHH ALVGAYPAAVVLSSHINDKPIDIPAEQSWAVPGIAVAIHKIARELEGAGWASNRPVWHPQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARLTALPAWQSGTAEALSQHMQLISELAPYEGAPDSDLAAAARLLTEVSGEPMRPRLTAA HHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH AEALNRFDTRASRGLAMRPMPEEIMPQELALFAGWAAEDRAALSDQINALQEGGGWPASK HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC DDITAFYRAKARAHVAHEMFAANADKAYNLSNTAILVAADRAETAWGRAAEMKPILVSNQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCEEEECC SDSAVLNPNHLASMAYFLLEAEVASRHLIELMAPPAADEVIEETSVAQTDEAAEVALP CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA