| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is murI [H]
Identifier: 114799484
GI number: 114799484
Start: 3152191
End: 3153063
Strand: Reverse
Name: murI [H]
Synonym: HNE_2992
Alternate gene names: 114799484
Gene position: 3153063-3152191 (Counterclockwise)
Preceding gene: 114798864
Following gene: 114799207
Centisome position: 85.1
GC content: 66.09
Gene sequence:
>873_bases ATGACCGCCGACGCGCCGTTCCCGTTTGAGCCTTCGCCCGCCAGGGGGCGTGTTCTGGTGTTTGATTCCGGCGTTGGCGG GCTCACCGTTGCCGCTGAAATCCGCGCGCTGGGGCCGCGCCTCTCGGTCCACTACGCTGCCGACACCGGCTTTTTCCCAT ATGGGGACAAGTCCGATGAGGCCCTGCGCGCGCGCTTGCCGGTGGTTGCAAAAGCGCTGGTCGAGGCGGTCCGGCCGGAT GTTTTCGTCATCGCCTGCAACACGGCCAGCACACTGGCGCTCCCCGAAGTGCGCGCCGTCCTCGATATTCCCGTCGTCGG TACTGTCCCTGCCATCAAGCCGGCGGCAAAGCTCACCGAAACCGGCACCATCGGCCTCCTCGCCACGCCGGGCACCATCC GTCGCGCCTATACGGCCCGCCTGATCGAGGAATTTGCCAGTGGCAAGCGCGTCATCCTCCATGGCAGCCTGGATCTGGTG AAACTCGCCGAGGCTCATGCGCGGGGGGAAGACGTGCCGCCCGAGGCTTTTGCCGCCGCGCAGGCCCCGCTGTTCACTGC GCCGGGCGGCGATCAGATCGACACGATTGTACTCGCCTGCACGCATTTCCCGCTGGTGCGCGGCCAGCTCATCGCGACGG CGCCCCATGCCGTCAGCTATATCGATTCCGGCGCGGCCATTGCCCGCCAGACGATCCGTGTGCTGCCTGCCAGAAACGAG TCAGGCGGACAGGGAGGCACAGCGTGCCTCACAAGTCCGCCTGAAAGGGAAGAGGGGATCACCCGCGTCCTGAGACGCTA CGGCTTTCCCGAAGTTCAGTTCGTGGCCATCGAGCCGATCGAGATGACTTCAGCGCCTTCGGCCGAGCCATAG
Upstream 100 bases:
>100_bases TCTTTTCTACGACGCTATTGTGCGCTGCACAACAAAACTCGTGCCAAAAGCCTGAAACGGCCCCGTTTTCGCCGCCAGAG AATGGTCTTAACTGGGACTC
Downstream 100 bases:
>100_bases AGCGACGGCCAGGGGCTGTCCTGAACAATCGCCACATCGGACTCGCCAAACCCGTTGAAGCGGGTGGCCATCGAACGGCC ATAGGCGCCGATGTTGCCGA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTADAPFPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARLPVVAKALVEAVRPD VFVIACNTASTLALPEVRAVLDIPVVGTVPAIKPAAKLTETGTIGLLATPGTIRRAYTARLIEEFASGKRVILHGSLDLV KLAEAHARGEDVPPEAFAAAQAPLFTAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARNE SGGQGGTACLTSPPEREEGITRVLRRYGFPEVQFVAIEPIEMTSAPSAEP
Sequences:
>Translated_290_residues MTADAPFPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARLPVVAKALVEAVRPD VFVIACNTASTLALPEVRAVLDIPVVGTVPAIKPAAKLTETGTIGLLATPGTIRRAYTARLIEEFASGKRVILHGSLDLV KLAEAHARGEDVPPEAFAAAQAPLFTAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARNE SGGQGGTACLTSPPEREEGITRVLRRYGFPEVQFVAIEPIEMTSAPSAEP >Mature_289_residues TADAPFPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDEALRARLPVVAKALVEAVRPDV FVIACNTASTLALPEVRAVLDIPVVGTVPAIKPAAKLTETGTIGLLATPGTIRRAYTARLIEEFASGKRVILHGSLDLVK LAEAHARGEDVPPEAFAAAQAPLFTAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARNES GGQGGTACLTSPPEREEGITRVLRRYGFPEVQFVAIEPIEMTSAPSAEP
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=270, Percent_Identity=44.4444444444444, Blast_Score=194, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 30416; Mature: 30285
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADAPFPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDE CCCCCCCCCCCCCCCCEEEEEECCCCCEEHEEHHHHCCCCEEEEEEECCCCCCCCCCCCH ALRARLPVVAKALVEAVRPDVFVIACNTASTLALPEVRAVLDIPVVGTVPAIKPAAKLTE HHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCHHHHHHEECCCCCCCCCCCCHHHHCC TGTIGLLATPGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAAA CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHC QAPLFTAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARNE CCCEEECCCCCCHHEEEEEECCCCHHCCEEEEECCHHHHHHCCCHHHHHHHHHEECCCCC SGGQGGTACLTSPPEREEGITRVLRRYGFPEVQFVAIEPIEMTSAPSAEP CCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCC >Mature Secondary Structure TADAPFPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDE CCCCCCCCCCCCCCCEEEEEECCCCCEEHEEHHHHCCCCEEEEEEECCCCCCCCCCCCH ALRARLPVVAKALVEAVRPDVFVIACNTASTLALPEVRAVLDIPVVGTVPAIKPAAKLTE HHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCHHHHHHEECCCCCCCCCCCCHHHHCC TGTIGLLATPGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAAA CCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHC QAPLFTAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARNE CCCEEECCCCCCHHEEEEEECCCCHHCCEEEEECCHHHHHHCCCHHHHHHHHHEECCCCC SGGQGGTACLTSPPEREEGITRVLRRYGFPEVQFVAIEPIEMTSAPSAEP CCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA