| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pstS [H]
Identifier: 114799207
GI number: 114799207
Start: 3149685
End: 3150782
Strand: Reverse
Name: pstS [H]
Synonym: HNE_2990
Alternate gene names: 114799207
Gene position: 3150782-3149685 (Counterclockwise)
Preceding gene: 114799484
Following gene: 114799148
Centisome position: 85.04
GC content: 62.84
Gene sequence:
>1098_bases ATGCTCACCCGTCTTTCCTGCCTGCTGGGCGCTGCATTGCTGCTTGTATCGGCGTGCGGCCAGAGCGAGCTTTCGCAGAT CGATACCGGAGAGCCGGGCGTCAAGCCGGTGCCCGCCATCGCCCGCAACCAGAAGATCAAGATCGTCGGCTCCTCCACAG TGGCGCCCTTCTCGCGCACCGTGGCAGAGCGGTTCGGCGCCGTCAGCGGCTTTCCCACCCCCATCGTCGAAACCACCGGC ACAGGCGGCGGCTTCAAGGCGTTCTGCGAAGGCGTCGGCCCGGTCTCGCCTTCGATTGCCAATGCCTCCCGCCCGATGAA GGATTCCGAGCGCGAGCTGTGCGCCAAGGCCGGCGTCAAGGCGATCACCGAAGTGGCGCTGGGCTATGACGGCATCGTGG TGGCCAACTCCAAGCTCGGCCCGGATTTCGATCTCACCAAGGAACAGCTCTATCTCGCCCTCGCCAAGGAGATCCCGGAC GGGAAGGGCGGCTTCATGCCAAACCCGCACAAGAACTGGCAGGATGTCTCGCCCGATCTTCCCAACGGCCCCATCGTGGT TCTTGGCCCGCCGCCCACATCGGGCACGCGAGATGCCTTTGTTGAACTCGGTATGGAAAAAGGCGCTGAAGCGATCCCGC AGCTCAAAGCCCTGAAAGAGAGCGACGGCGACGCGTTTGCAGAGCGGGCCCATACGGTGCGCACGGACGGTGTCTGGGTC GATTTCGGCGAGAATGATTCAGCCATTGTCCAGTCGCTGGTCAAATCGCCCGAGGCCATCGGCGTGCTCGGCTTCTCTTT CCTCGAGCAGAACGGCGACCGTGTAAAAGGCGCCCGCCTGGCCGGGGTTGAGGCCAGCTTCGACAATATCGTCAGCGGTG ATTATGGCCTCGCCCGCATCATGTTCTTCTATGTGAAGGACCAGAACCTGCCGCTCGTCGAAGGCCTTGCCGAATTCGTC TCCGCCTCGGTCGATGAAGGCGCTGCCGGCAATGATGGCTATCTCATCGAGAAAGGCCTCATTCCGCTGCCGGAAGCCGA CCTCGAAACCCAGCAGGCGCTCGCCAAACAGCTTGAAGCCAAAGTCCGCGCCTACTGA
Upstream 100 bases:
>100_bases AGGGTAACGCAACCGCGCCAGATAGCGCTTGCAAACTTGGTAAAATGGCGGTCCACAAACCGCGTCCTCTGCGGCGCACG CCATTCCCGGAGGTCTCCTG
Downstream 100 bases:
>100_bases GCCTAGAAGCCCGGCCCGGCCGGTGAGCGTCTCCGGCGGATACGGATCTTCTGCCAGAAGCGCTTGCGCTCGGGCGCCGG CAGCGGCTGCAGGTTCTCGA
Product: putative phosphate ABC transporter periplasmic phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MLTRLSCLLGAALLLVSACGQSELSQIDTGEPGVKPVPAIARNQKIKIVGSSTVAPFSRTVAERFGAVSGFPTPIVETTG TGGGFKAFCEGVGPVSPSIANASRPMKDSERELCAKAGVKAITEVALGYDGIVVANSKLGPDFDLTKEQLYLALAKEIPD GKGGFMPNPHKNWQDVSPDLPNGPIVVLGPPPTSGTRDAFVELGMEKGAEAIPQLKALKESDGDAFAERAHTVRTDGVWV DFGENDSAIVQSLVKSPEAIGVLGFSFLEQNGDRVKGARLAGVEASFDNIVSGDYGLARIMFFYVKDQNLPLVEGLAEFV SASVDEGAAGNDGYLIEKGLIPLPEADLETQQALAKQLEAKVRAY
Sequences:
>Translated_365_residues MLTRLSCLLGAALLLVSACGQSELSQIDTGEPGVKPVPAIARNQKIKIVGSSTVAPFSRTVAERFGAVSGFPTPIVETTG TGGGFKAFCEGVGPVSPSIANASRPMKDSERELCAKAGVKAITEVALGYDGIVVANSKLGPDFDLTKEQLYLALAKEIPD GKGGFMPNPHKNWQDVSPDLPNGPIVVLGPPPTSGTRDAFVELGMEKGAEAIPQLKALKESDGDAFAERAHTVRTDGVWV DFGENDSAIVQSLVKSPEAIGVLGFSFLEQNGDRVKGARLAGVEASFDNIVSGDYGLARIMFFYVKDQNLPLVEGLAEFV SASVDEGAAGNDGYLIEKGLIPLPEADLETQQALAKQLEAKVRAY >Mature_365_residues MLTRLSCLLGAALLLVSACGQSELSQIDTGEPGVKPVPAIARNQKIKIVGSSTVAPFSRTVAERFGAVSGFPTPIVETTG TGGGFKAFCEGVGPVSPSIANASRPMKDSERELCAKAGVKAITEVALGYDGIVVANSKLGPDFDLTKEQLYLALAKEIPD GKGGFMPNPHKNWQDVSPDLPNGPIVVLGPPPTSGTRDAFVELGMEKGAEAIPQLKALKESDGDAFAERAHTVRTDGVWV DFGENDSAIVQSLVKSPEAIGVLGFSFLEQNGDRVKGARLAGVEASFDNIVSGDYGLARIMFFYVKDQNLPLVEGLAEFV SASVDEGAAGNDGYLIEKGLIPLPEADLETQQALAKQLEAKVRAY
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38362; Mature: 38362
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRLSCLLGAALLLVSACGQSELSQIDTGEPGVKPVPAIARNQKIKIVGSSTVAPFSRT CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCHHHHH VAERFGAVSGFPTPIVETTGTGGGFKAFCEGVGPVSPSIANASRPMKDSERELCAKAGVK HHHHHCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH AITEVALGYDGIVVANSKLGPDFDLTKEQLYLALAKEIPDGKGGFMPNPHKNWQDVSPDL HHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PNGPIVVLGPPPTSGTRDAFVELGMEKGAEAIPQLKALKESDGDAFAERAHTVRTDGVWV CCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHEEEECCEEE DFGENDSAIVQSLVKSPEAIGVLGFSFLEQNGDRVKGARLAGVEASFDNIVSGDYGLARI EECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCEEECCCCCHHHHCCCCHHHHEE MFFYVKDQNLPLVEGLAEFVSASVDEGAAGNDGYLIEKGLIPLPEADLETQQALAKQLEA EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH KVRAY HHCCC >Mature Secondary Structure MLTRLSCLLGAALLLVSACGQSELSQIDTGEPGVKPVPAIARNQKIKIVGSSTVAPFSRT CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCHHHHH VAERFGAVSGFPTPIVETTGTGGGFKAFCEGVGPVSPSIANASRPMKDSERELCAKAGVK HHHHHCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH AITEVALGYDGIVVANSKLGPDFDLTKEQLYLALAKEIPDGKGGFMPNPHKNWQDVSPDL HHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PNGPIVVLGPPPTSGTRDAFVELGMEKGAEAIPQLKALKESDGDAFAERAHTVRTDGVWV CCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHEEEECCEEE DFGENDSAIVQSLVKSPEAIGVLGFSFLEQNGDRVKGARLAGVEASFDNIVSGDYGLARI EECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCEEECCCCCHHHHCCCCHHHHEE MFFYVKDQNLPLVEGLAEFVSASVDEGAAGNDGYLIEKGLIPLPEADLETQQALAKQLEA EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH KVRAY HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA