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The map label for this gene is ydhJ [C]

Identifier: 114799367

GI number: 114799367

Start: 838225

End: 839343

Strand: Reverse

Name: ydhJ [C]

Synonym: HNE_0816

Alternate gene names: 114799367

Gene position: 839343-838225 (Counterclockwise)

Preceding gene: 114797830

Following gene: 114800248

Centisome position: 22.65

GC content: 62.29

Gene sequence:

>1119_bases
ATGCCCTATTTTACGACCGTCCTCCCAGGAAAGATCTCTCCCGTGAACCGTTCCGTCCTGATCGCAGCCATTATTCTGGC
GGTTATTCTCGCCTACTTCGGAGTCCGCAGCGTGATGCGCGGAAGTATCAGCACGGAACAGTCCGTCGCTGAAGCGTCTA
CCAGGTCGGAAACGCCGCAGGCGCTGGTTGTTGAGGCGCAAAGCCAGCTTCATACCATCCGTGTCGCCGCCAAAGGACGT
ACCGCGCCTGACAAATCCGTGACACTGAAATCTGGTACGTCCGGCACCGTTGTCTCCACACCGGTCCGTGAAGGAACATT
CGTGAAAGCCGGAACCCTGCTTTGCGGCCTTGATGTCGAAGCGCGCAGCGCGCGCGTTCAGGAAGCCGAAGCTGGCCGCG
ACTCGGCAAGGGTGGATTATGAAGCTGCGGTCAAACTCGCGGAAAAGGGGCTGACACCGGCCAACCGGGAAGCATCGGCC
AAGGCCACGCTGGACGCGGCTGAAGCGGCCGTGAACGCCGCAAAGGTGGAACTGGGCCGCACACAAATCCGCGCGCCGTT
CGCCGGCGTGTTTGAGCGCCGGATGGCCGAGGCAGGCGATTACCTTTCGCCAGGCGGCGCCTGTGGCTTGCTGGTGGATC
TTGATCCCGTGATCGTGGCCGCTGAAGTGACCGAAGCGCAGGCGGGCCTTCTCCAGAAGGACATGGCCGCTGACGTGCTG
CTGGCTGACGGGCGGACGTTTCCGGCAAAACTGCGGTTCGTGGCGCGCACGGCAAACGAACAGACGCGTACTTTCCTGAT
TGAAGCGGAACTTGAAACCGGTGACGCCATCGTGGCCGCCGGCATCACCGCCTCGATGACCCTTCCTGCCGGCGATGTGC
AGGCCACCCTGATCAAGCCGTCGCTCCTGACACTGTCCGATGGCGGCCAGCTTGGCGTGCGCCATGTCGTGGATGACAAT
GTCGTCGCGTTCGCGCCGGTTCAGGTGATTGACGAAACACCGCAAGGCGCCTGGGTAACCGGCCTGCCCGAGCGCGTCCT
CCTCATTTCAATGGGCCAGGATTATCTCAATGACGGCGTGACCATCAAACCGGTTCCGGCCGAGGGAGCCCGTCCATGA

Upstream 100 bases:

>100_bases
TCAGATCAAGCAATTAACCAAAGTGTTCCCGTCCTTTGCAGGCTGGAAACGCCTCGTGTGCTAGAAATCTTTTAGCACGA
ACCCTGACTCTTGCGTCAGG

Downstream 100 bases:

>100_bases
CAGGCGTCGTCGATTGGGCAATCGGCCGGACCCGGATGATCCTGACCATCCTGGTTTGTGTGCTGTTTGCAGGCACGATC
ACCTATATCAACATGCCCAA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; HlyD Family Secretion Protein; Efflux Transporter; Protein Secretion Protein; Multidrug Efflux Transporter VexE; Efflux System Protein; Periplasmic Component Of Efflux System; Auxiliary Transport Protein MFP Family; RND Family Multidrug Transporter Membrane Fusion Protein; Periplasmic Linker Protein; Membrane-Fusion Protein AcrA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MPYFTTVLPGKISPVNRSVLIAAIILAVILAYFGVRSVMRGSISTEQSVAEASTRSETPQALVVEAQSQLHTIRVAAKGR
TAPDKSVTLKSGTSGTVVSTPVREGTFVKAGTLLCGLDVEARSARVQEAEAGRDSARVDYEAAVKLAEKGLTPANREASA
KATLDAAEAAVNAAKVELGRTQIRAPFAGVFERRMAEAGDYLSPGGACGLLVDLDPVIVAAEVTEAQAGLLQKDMAADVL
LADGRTFPAKLRFVARTANEQTRTFLIEAELETGDAIVAAGITASMTLPAGDVQATLIKPSLLTLSDGGQLGVRHVVDDN
VVAFAPVQVIDETPQGAWVTGLPERVLLISMGQDYLNDGVTIKPVPAEGARP

Sequences:

>Translated_372_residues
MPYFTTVLPGKISPVNRSVLIAAIILAVILAYFGVRSVMRGSISTEQSVAEASTRSETPQALVVEAQSQLHTIRVAAKGR
TAPDKSVTLKSGTSGTVVSTPVREGTFVKAGTLLCGLDVEARSARVQEAEAGRDSARVDYEAAVKLAEKGLTPANREASA
KATLDAAEAAVNAAKVELGRTQIRAPFAGVFERRMAEAGDYLSPGGACGLLVDLDPVIVAAEVTEAQAGLLQKDMAADVL
LADGRTFPAKLRFVARTANEQTRTFLIEAELETGDAIVAAGITASMTLPAGDVQATLIKPSLLTLSDGGQLGVRHVVDDN
VVAFAPVQVIDETPQGAWVTGLPERVLLISMGQDYLNDGVTIKPVPAEGARP
>Mature_371_residues
PYFTTVLPGKISPVNRSVLIAAIILAVILAYFGVRSVMRGSISTEQSVAEASTRSETPQALVVEAQSQLHTIRVAAKGRT
APDKSVTLKSGTSGTVVSTPVREGTFVKAGTLLCGLDVEARSARVQEAEAGRDSARVDYEAAVKLAEKGLTPANREASAK
ATLDAAEAAVNAAKVELGRTQIRAPFAGVFERRMAEAGDYLSPGGACGLLVDLDPVIVAAEVTEAQAGLLQKDMAADVLL
ADGRTFPAKLRFVARTANEQTRTFLIEAELETGDAIVAAGITASMTLPAGDVQATLIKPSLLTLSDGGQLGVRHVVDDNV
VAFAPVQVIDETPQGAWVTGLPERVLLISMGQDYLNDGVTIKPVPAEGARP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081951, Length=192, Percent_Identity=26.0416666666667, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38840; Mature: 38709

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYFTTVLPGKISPVNRSVLIAAIILAVILAYFGVRSVMRGSISTEQSVAEASTRSETPQ
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
ALVVEAQSQLHTIRVAAKGRTAPDKSVTLKSGTSGTVVSTPVREGTFVKAGTLLCGLDVE
EEEEECHHCEEEEEEEECCCCCCCCCEEEECCCCCCEEECCCCCCCEEEECEEEEECCCH
ARSARVQEAEAGRDSARVDYEAAVKLAEKGLTPANREASAKATLDAAEAAVNAAKVELGR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCH
TQIRAPFAGVFERRMAEAGDYLSPGGACGLLVDLDPVIVAAEVTEAQAGLLQKDMAADVL
HHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHCEEE
LADGRTFPAKLRFVARTANEQTRTFLIEAELETGDAIVAAGITASMTLPAGDVQATLIKP
EECCCCCHHHEEEEECCCCCCEEEEEEEEECCCCCEEEEECCEEEEECCCCCCEEEEECC
SLLTLSDGGQLGVRHVVDDNVVAFAPVQVIDETPQGAWVTGLPERVLLISMGQDYLNDGV
EEEEECCCCCCCEEEEECCCEEEEEEHEEECCCCCCCEEECCCCEEEEEECCHHHHCCCC
TIKPVPAEGARP
EEEECCCCCCCC
>Mature Secondary Structure 
PYFTTVLPGKISPVNRSVLIAAIILAVILAYFGVRSVMRGSISTEQSVAEASTRSETPQ
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
ALVVEAQSQLHTIRVAAKGRTAPDKSVTLKSGTSGTVVSTPVREGTFVKAGTLLCGLDVE
EEEEECHHCEEEEEEEECCCCCCCCCEEEECCCCCCEEECCCCCCCEEEECEEEEECCCH
ARSARVQEAEAGRDSARVDYEAAVKLAEKGLTPANREASAKATLDAAEAAVNAAKVELGR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCH
TQIRAPFAGVFERRMAEAGDYLSPGGACGLLVDLDPVIVAAEVTEAQAGLLQKDMAADVL
HHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHCEEE
LADGRTFPAKLRFVARTANEQTRTFLIEAELETGDAIVAAGITASMTLPAGDVQATLIKP
EECCCCCHHHEEEEECCCCCCEEEEEEEEECCCCCEEEEECCEEEEECCCCCCEEEEECC
SLLTLSDGGQLGVRHVVDDNVVAFAPVQVIDETPQGAWVTGLPERVLLISMGQDYLNDGV
EEEEECCCCCCCEEEEECCCEEEEEEHEEECCCCCCCEEECCCCEEEEEECCHHHHCCCC
TIKPVPAEGARP
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA