Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799295
Identifier: 114799295
GI number: 114799295
Start: 390627
End: 391298
Strand: Direct
Name: 114799295
Synonym: HNE_0395
Alternate gene names: NA
Gene position: 390627-391298 (Clockwise)
Preceding gene: 114798082
Following gene: 114800234
Centisome position: 10.54
GC content: 45.54
Gene sequence:
>672_bases TTGGGTGGGAAAGTGGCGAACCAATATCCTTACGTCTCTTCAGCAGGCTCTATTGGCCAAGCTTTGGAGCAGTTTCGTAA GAAACTGCCTCAGACTATAGATTCCGATACGTTGAAACAGTTGGAGCTAGCTCCAAACAATGAATCCTATTTGATCAATG TATTGAAGTTCATCGGGATCGTAGATGAAGCAGGCAAAGCTGACTCGAAGAAGTCAGAGATATTCTACGCAGACGATACG CAGTATATAGCAGGGTTATCAGAACTTATTGAAGCAGCCTACTCTTCATTGTTCGATCTACATGGGGCGGTCGCTTGGAA CCTCGACAAGGGAAAGCTGACGAGTTTTTTCCGGCAGGCGGACAAGACTAGCGAAATTGTAGGAGGTAGGCAGACAAATA CTTTTGTTGCTCTAGCGGTTGCCGCGAAAAAGAGGGATGGAGTGGAGGATAAAGGAACATCTAACGGAACTTCAAAACCC AAAAAGTCTCCCAAGCCAACTGTGGTAGCCAAGAAGACGACAGTTGCCGAGCAGACAACTGTCGAGTTGGCAAAACCGAA TGGCTCCCCAGTGTCACTCAATGTCCGAATTGAAGTAGTTCTTCCTTCGAATTCTACTAAGGAAACTTACGACAATATAT TTAAGAGCATTCGAGAGAACCTGATTGACTGA
Upstream 100 bases:
>100_bases GTTTTCTATCAATTGTGAACGCAAGCGCTCCAATCAATGAAATAATTCCCCATTGAAAACAGTTCTTGCTCTCCCATCTA TCTCACAATTCTAGTTTTGG
Downstream 100 bases:
>100_bases GCCGTACAATGGATCTCGACAAATTTGAAAAGTTGGTGCGGTCGGCCAAGCAGATTTCTTCTGGCGAAGAGCCCCGACAA TCACATCCGTTTTTAGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGGKVANQYPYVSSAGSIGQALEQFRKKLPQTIDSDTLKQLELAPNNESYLINVLKFIGIVDEAGKADSKKSEIFYADDT QYIAGLSELIEAAYSSLFDLHGAVAWNLDKGKLTSFFRQADKTSEIVGGRQTNTFVALAVAAKKRDGVEDKGTSNGTSKP KKSPKPTVVAKKTTVAEQTTVELAKPNGSPVSLNVRIEVVLPSNSTKETYDNIFKSIRENLID
Sequences:
>Translated_223_residues MGGKVANQYPYVSSAGSIGQALEQFRKKLPQTIDSDTLKQLELAPNNESYLINVLKFIGIVDEAGKADSKKSEIFYADDT QYIAGLSELIEAAYSSLFDLHGAVAWNLDKGKLTSFFRQADKTSEIVGGRQTNTFVALAVAAKKRDGVEDKGTSNGTSKP KKSPKPTVVAKKTTVAEQTTVELAKPNGSPVSLNVRIEVVLPSNSTKETYDNIFKSIRENLID >Mature_222_residues GGKVANQYPYVSSAGSIGQALEQFRKKLPQTIDSDTLKQLELAPNNESYLINVLKFIGIVDEAGKADSKKSEIFYADDTQ YIAGLSELIEAAYSSLFDLHGAVAWNLDKGKLTSFFRQADKTSEIVGGRQTNTFVALAVAAKKRDGVEDKGTSNGTSKPK KSPKPTVVAKKTTVAEQTTVELAKPNGSPVSLNVRIEVVLPSNSTKETYDNIFKSIRENLID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24208; Mature: 24076
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGKVANQYPYVSSAGSIGQALEQFRKKLPQTIDSDTLKQLELAPNNESYLINVLKFIGI CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH VDEAGKADSKKSEIFYADDTQYIAGLSELIEAAYSSLFDLHGAVAWNLDKGKLTSFFRQA HHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH DKTSEIVGGRQTNTFVALAVAAKKRDGVEDKGTSNGTSKPKKSPKPTVVAKKTTVAEQTT HHHHHHCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHE VELAKPNGSPVSLNVRIEVVLPSNSTKETYDNIFKSIRENLID EEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGKVANQYPYVSSAGSIGQALEQFRKKLPQTIDSDTLKQLELAPNNESYLINVLKFIGI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHH VDEAGKADSKKSEIFYADDTQYIAGLSELIEAAYSSLFDLHGAVAWNLDKGKLTSFFRQA HHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH DKTSEIVGGRQTNTFVALAVAAKKRDGVEDKGTSNGTSKPKKSPKPTVVAKKTTVAEQTT HHHHHHCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHE VELAKPNGSPVSLNVRIEVVLPSNSTKETYDNIFKSIRENLID EEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA