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The map label for this gene is motB [H]

Identifier: 114799250

GI number: 114799250

Start: 913147

End: 913827

Strand: Reverse

Name: motB [H]

Synonym: HNE_0894

Alternate gene names: 114799250

Gene position: 913827-913147 (Counterclockwise)

Preceding gene: 114800380

Following gene: 114799991

Centisome position: 24.66

GC content: 62.7

Gene sequence:

>681_bases
ATGGCATATGCCACGACCTCTCGGCGGCAGACGGGCAGAAGGCCCGTTATGCCTACCCGGAAAACGGGTACCTGGAAGCT
GGCTTATGCCGACTTCCTGACCGCCCTGGTCGCGTTCTTCATGCTTATGTGGCTGGTCAGCGGGGTCTCGAAAGAAGACC
GCGCGGTGATCGCCTCTGAATTTACCGGCAAGCCGGTTTCCACCGCTTTCCACAGTGATCAGGCCGTTTCGGGCGCTGCT
GAGCTGCTCGCTTTGCTGCGGCAGTCCGAAGGCCTGAAAGCGGCAGGCGAGAGTGTACAGCTCTCATCTGATGCAACCGG
CGTGCGGATTGAACTTGTGGATACCGCCGGCCGGCCGCTGTTTGAGACGGGAAGCGGGGCGCTGACGGCAGACGGCGCGG
CGCTGATCCAGGCGGCAGCGATGAGCCTTTCAGGCCTGCCTTATGCCCTCTCGATTGAAGGCCATACGGATGCTTTCTCA
ATGACAGGCGCGGCGTCCTCGAACTGGGAGCTGTCTTCGCAGCGGGCAAATGAGGCCCGCAGGGCGCTCGAGATGGCCGG
TTTCGGGACAGATCGGGTCAAGGCGGTGACAGGATATGCCGATACGCGGCCCCTCAATGCCGGACAGCCCCACCTGGCTG
CCAACCGCCGGATCAGCCTTCAGGTTCATCTGGCCGACTGA

Upstream 100 bases:

>100_bases
GCGAATTTCATCGAAATCCCACCCCTGGCCGAAGCGTGGCTTTCACCACGACCTGATACACCCTGCGTCATCCATCAGAA
GGATCGGACGCAAAAGAGCA

Downstream 100 bases:

>100_bases
TTTGTTACCGCCGGGGCACAGAAGCGGGCCATTCTTGCCGCGCAGCTGCCCCTGCCCTTAAATGGCCACTTGGCGGATTT
CCCGCGCGGTGTATCGTTTA

Product: putative chemotaxis protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAYATTSRRQTGRRPVMPTRKTGTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASEFTGKPVSTAFHSDQAVSGAA
ELLALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPLFETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFS
MTGAASSNWELSSQRANEARRALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQVHLAD

Sequences:

>Translated_226_residues
MAYATTSRRQTGRRPVMPTRKTGTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASEFTGKPVSTAFHSDQAVSGAA
ELLALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPLFETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFS
MTGAASSNWELSSQRANEARRALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQVHLAD
>Mature_225_residues
AYATTSRRQTGRRPVMPTRKTGTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASEFTGKPVSTAFHSDQAVSGAAE
LLALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPLFETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFSM
TGAASSNWELSSQRANEARRALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQVHLAD

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=242, Percent_Identity=35.1239669421488, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 23878; Mature: 23747

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYATTSRRQTGRRPVMPTRKTGTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASE
CCCCCCCHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
FTGKPVSTAFHSDQAVSGAAELLALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPL
CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCE
FETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFSMTGAASSNWELSSQRANEAR
EECCCCCEEECHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHH
RALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQVHLAD
HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
AYATTSRRQTGRRPVMPTRKTGTWKLAYADFLTALVAFFMLMWLVSGVSKEDRAVIASE
CCCCCCHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
FTGKPVSTAFHSDQAVSGAAELLALLRQSEGLKAAGESVQLSSDATGVRIELVDTAGRPL
CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCE
FETGSGALTADGAALIQAAAMSLSGLPYALSIEGHTDAFSMTGAASSNWELSSQRANEAR
EECCCCCEEECHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHH
RALEMAGFGTDRVKAVTGYADTRPLNAGQPHLAANRRISLQVHLAD
HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]