Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799232
Identifier: 114799232
GI number: 114799232
Start: 659030
End: 659890
Strand: Direct
Name: 114799232
Synonym: HNE_0657
Alternate gene names: NA
Gene position: 659030-659890 (Clockwise)
Preceding gene: 114800409
Following gene: 114799113
Centisome position: 17.79
GC content: 65.74
Gene sequence:
>861_bases ATGCCGGAATTCAATGATCCGCGCCTTGCCCGCCCAGAGGGCGCTGGCACGGCGTTTCAGGTCAGCGCTGGCGCCACCGC GATCCGGGAGATCCCTGCACCCGACGGCCGCGCCGTAACCTTTGCCCTGCATGGGGAAGTGGTCGATGTGTTCCGGGAGG AGGGGGAGTTCGGCCTCGTCCAGTGCCGGCGAGACCGGTATACCGGCTGGGCGCTCATGGAGGCGCTCTCGGCCCCGGTC ATGGCGCCGACGCACAAGGTGTCAGCCCTGCGCACCTATGCCTTCTCGGAGCCCGACATCAAATCCGCCCCGCATTTCAT GCTCAGTCTGGGCGCGCGGGTCGTGGCCACCGGCCGGAAGGAAGGCGCCCTGATCGAATGCGTGCGGGCGGGGTGGGTTC CGCAAGGCCACCTGGCGCCGCTCGATCAGTTCGAACCAGACCCCGCAGGCGTCGCCCTGCGCTTCCTGGAGGCCCCTTAC CTGTGGGGCGGGCGGGAGAGCCTGGGGCTGGACTGTACCGGCCTCACCCAGCAGGCATTTGAAGCCTGCGGTGTCCTCCT GCCGCGCGATTCTGACATGCAGCTTGCCTGGGCTGGCACGGAAGTGTCCGGTTTTGTCCAGGTTTGTCCTGAAAGTGTCA GCCTGTGTCGCGGTGATCTCGTCTTCTGGCGCGATCATGTCGGCATCCTGACTGCGCCTGACACGCTCCTTCACGCCAAC GCCTACCATATGAAGGTCGCGCAGGAGCCTCTGGCCGAAGCCATTGAAAGAATTGAGAAATCTACCGGTCCCGTCCTGTC TGTGCGCCGCATCGACCTCGCCGCAGACCGCGCAAAAATCCCGGACTGGCTCAGCGCCTGA
Upstream 100 bases:
>100_bases CTGGCGGCCGCTTCCGGTGAAGAAACGGGCTCGGGCAAGCCGCCGCGCCGCAACTCTGCGGTCGCCTGAGGCGGGCTGCC CGTTAGGGAGGCCCTCTGCC
Downstream 100 bases:
>100_bases ATTCCAGAACCCTGTTTTTCCAAAGAAAAACCCCGGCCAGGGCCGGGGTTTAAATTCTGATCGAAATTTTGAACCCCGAC TTACTCGGCAGGGGCTTCTT
Product: NlpC/P60 family protein
Products: NA
Alternate protein names: NLP/P60 Family Protein; NlpC/P60 Family Protein; Cell Wall-Associated Hydrolase; Endopeptidase-Related Protein; NlpC/P60 Domain-Containing Protein; Nlp/P60 Protein; NLP/P60 Family Lipoprotein; NlpC/P60 Domain Protein; Multi-Domain Protein; Cell Wall Hydrolase; Peptidase/Amylase-Like Protein; Dipeptidyl-Peptidase; Hydrolase; Gamma-D-Glutamyl-Meso-Diaminopimelate Peptidase; Pipeptidyl-Peptidase VI; Peptidase/Amylase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPEFNDPRLARPEGAGTAFQVSAGATAIREIPAPDGRAVTFALHGEVVDVFREEGEFGLVQCRRDRYTGWALMEALSAPV MAPTHKVSALRTYAFSEPDIKSAPHFMLSLGARVVATGRKEGALIECVRAGWVPQGHLAPLDQFEPDPAGVALRFLEAPY LWGGRESLGLDCTGLTQQAFEACGVLLPRDSDMQLAWAGTEVSGFVQVCPESVSLCRGDLVFWRDHVGILTAPDTLLHAN AYHMKVAQEPLAEAIERIEKSTGPVLSVRRIDLAADRAKIPDWLSA
Sequences:
>Translated_286_residues MPEFNDPRLARPEGAGTAFQVSAGATAIREIPAPDGRAVTFALHGEVVDVFREEGEFGLVQCRRDRYTGWALMEALSAPV MAPTHKVSALRTYAFSEPDIKSAPHFMLSLGARVVATGRKEGALIECVRAGWVPQGHLAPLDQFEPDPAGVALRFLEAPY LWGGRESLGLDCTGLTQQAFEACGVLLPRDSDMQLAWAGTEVSGFVQVCPESVSLCRGDLVFWRDHVGILTAPDTLLHAN AYHMKVAQEPLAEAIERIEKSTGPVLSVRRIDLAADRAKIPDWLSA >Mature_285_residues PEFNDPRLARPEGAGTAFQVSAGATAIREIPAPDGRAVTFALHGEVVDVFREEGEFGLVQCRRDRYTGWALMEALSAPVM APTHKVSALRTYAFSEPDIKSAPHFMLSLGARVVATGRKEGALIECVRAGWVPQGHLAPLDQFEPDPAGVALRFLEAPYL WGGRESLGLDCTGLTQQAFEACGVLLPRDSDMQLAWAGTEVSGFVQVCPESVSLCRGDLVFWRDHVGILTAPDTLLHANA YHMKVAQEPLAEAIERIEKSTGPVLSVRRIDLAADRAKIPDWLSA
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31030; Mature: 30898
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEFNDPRLARPEGAGTAFQVSAGATAIREIPAPDGRAVTFALHGEVVDVFREEGEFGLV CCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCEEEE QCRRDRYTGWALMEALSAPVMAPTHKVSALRTYAFSEPDIKSAPHFMLSLGARVVATGRK EEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCC EGALIECVRAGWVPQGHLAPLDQFEPDPAGVALRFLEAPYLWGGRESLGLDCTGLTQQAF CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEHHHHCCCCCCCCCCCCCCCCCCHHHHH EACGVLLPRDSDMQLAWAGTEVSGFVQVCPESVSLCRGDLVFWRDHVGILTAPDTLLHAN HHHCEECCCCCCCEEEEECCCHHHHHHHCHHHHHHHCCCEEEEECCCCEEECCCHHEECC AYHMKVAQEPLAEAIERIEKSTGPVLSVRRIDLAADRAKIPDWLSA HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCHHCCCHHHCC >Mature Secondary Structure PEFNDPRLARPEGAGTAFQVSAGATAIREIPAPDGRAVTFALHGEVVDVFREEGEFGLV CCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCEEEE QCRRDRYTGWALMEALSAPVMAPTHKVSALRTYAFSEPDIKSAPHFMLSLGARVVATGRK EEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCC EGALIECVRAGWVPQGHLAPLDQFEPDPAGVALRFLEAPYLWGGRESLGLDCTGLTQQAF CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEHHHHCCCCCCCCCCCCCCCCCCHHHHH EACGVLLPRDSDMQLAWAGTEVSGFVQVCPESVSLCRGDLVFWRDHVGILTAPDTLLHAN HHHCEECCCCCCCEEEEECCCHHHHHHHCHHHHHHHCCCEEEEECCCCEEECCCHHEECC AYHMKVAQEPLAEAIERIEKSTGPVLSVRRIDLAADRAKIPDWLSA HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA