Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
---|---|
Accession | NC_008358 |
Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114799170
Identifier: 114799170
GI number: 114799170
Start: 3473667
End: 3473918
Strand: Reverse
Name: 114799170
Synonym: HNE_3320
Alternate gene names: NA
Gene position: 3473918-3473667 (Counterclockwise)
Preceding gene: 114798574
Following gene: 114797965
Centisome position: 93.76
GC content: 67.06
Gene sequence:
>252_bases ATGCCCCGCCGCGCCCTGAAGACATTGACCTACAGCGTGATGCATTTTGCCGTCGCGATTACCGTTGCCTTTGCCCTGAC GCGCAGCTGGCAGGCGGCGCTGGCCATCGGCATGATTGAGCCGCTGGTGCAGACGGTTGCCTATACCGTGCATGAGCGGG TGTGGGAGCGGCTGGGGATCGCGCCCAGGGGCGCCCTGCTGCCTGTGTCGGCTGAAACACCCGACGGGGTGGGGCCTGTG CAGCCCGCCTGA
Upstream 100 bases:
>100_bases TGCCCCATAGGCGCCCTCTATGACGCGGGCAACCGCTATCTATTTGAAAATCATTCTCAAGTGGCGCATCTATACGGCCA TGAGAATGAGGTTTCCCCCC
Downstream 100 bases:
>100_bases GCCTGAGGCGTGAGACTGTACCTTCCAGCGACGGCAAGGGTGGCCTGCCCGTGATTGCTGGGGCAGGGTCTTGCCGGAAC CGTCTGGGAGGACTTCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MPRRALKTLTYSVMHFAVAITVAFALTRSWQAALAIGMIEPLVQTVAYTVHERVWERLGIAPRGALLPVSAETPDGVGPV QPA
Sequences:
>Translated_83_residues MPRRALKTLTYSVMHFAVAITVAFALTRSWQAALAIGMIEPLVQTVAYTVHERVWERLGIAPRGALLPVSAETPDGVGPV QPA >Mature_82_residues PRRALKTLTYSVMHFAVAITVAFALTRSWQAALAIGMIEPLVQTVAYTVHERVWERLGIAPRGALLPVSAETPDGVGPVQ PA
Specific function: Unknown
COG id: COG3205
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8968; Mature: 8836
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRALKTLTYSVMHFAVAITVAFALTRSWQAALAIGMIEPLVQTVAYTVHERVWERLGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APRGALLPVSAETPDGVGPVQPA CCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure PRRALKTLTYSVMHFAVAITVAFALTRSWQAALAIGMIEPLVQTVAYTVHERVWERLGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APRGALLPVSAETPDGVGPVQPA CCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA